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WormBase Tree Display for Gene: WBGene00011045

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Name Class

WBGene00011045SMapS_parentSequenceR05H10
IdentityVersion2
NameCGC_namegpx-2Person_evidenceWBPerson261
Sequence_nameR05H10.5
Molecular_nameR05H10.5a
R05H10.5a.1
CE18107
R05H10.5b
CE48951
R05H10.5b.1
Other_nameCELE_R05H10.5Accession_evidenceNDBBX284602
Public_namegpx-2
DB_infoDatabase (13)
SpeciesCaenorhabditis elegans
HistoryVersion_change126 May 2004 16:54:52WBPerson1971EventImportedInitial conversion from CDS class of WS125
220 Jul 2012 14:20:02WBPerson2970Name_changeCGC_namegpx-2
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classgpx
Allele (74)
RNASeq_FPKM (74)
GO_annotation (12)
Contained_in_operonCEOP2652
Ortholog (40)
ParalogWBGene00007516Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00007517Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00009165Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
Panther
WormBase-Compara
WBGene00020373Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00022377Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00018850Caenorhabditis elegansFrom_analysisPanther
WBGene00019846Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable peroxidase activity. Predicted to be involved in cellular oxidant detoxification and response to oxidative stress. Predicted to be located in cytoplasm. Human ortholog(s) of this gene implicated in gastrointestinal system cancer (multiple) and spondylometaphyseal dysplasia Sedaghatian type. Is an ortholog of human GPX4 (glutathione peroxidase 4).Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Disease_infoPotential_modelDOID:9256Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:4556)
DOID:3717Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:4556)
DOID:1184Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:4556)
DOID:219Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:4556)
DOID:10591Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:4556)
DOID:0112298Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:4556)
DOID:0050861Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:4556)
Molecular_infoCorresponding_CDSR05H10.5a
R05H10.5b
Corresponding_transcriptR05H10.5a.1
R05H10.5b.1
Other_sequenceOOC01539_1
AS01976
ES740051.1
CBC04596_1
AS06841
AM743439.1
AYC00967_1
MH11168
PEC00225_1
Oden_isotig13305
MA02847
Acan_isotig04369
AS17553
MAC02440_1
RSC00392_1
BUC00757_1
FG619295.1
GRC00709_1
CJC05584_1
GP02905
AE00906
Tcir_isotig09438
Acan_isotig12666
PE00117
Acan_isotig12547
PPC02045_1
Tcir_isotig23513
AE02309
JI211236.1
JI464736.1
AW506173.1
PVC00653_1
MH02288
NBC00922_1
EX010871.1
XIC00732_1
RS10835
ES408889.1
GQ927327.1
PTC03558_1
RSC00341_1
EX556627.1
MJC00879_1
ES411074.1
JI174604.1
XI00895
Dviv_isotig15028
Tcir_isotig00995
MH10804
CR02053
BXC00589_1
RSC03156_1
ASC01055_1
ASC24838_1
Oden_isotig13306
GRC00086_1
HBC00966_1
AW506030.1
CBC11284_1
Name_isotig01472
Tcir_isotig01332
PP02504
Hbac_isotig03894
Tcir_isotig25901
MHC07857_1
BUC01855_1
NB06579
HCC01990_1
MI03461
EX914495.1
HGC03524_1
AYC04140_1
AW506459.1
AJ493678.1
HG06122
RS08581
EX009434.1
GR12023
BQ563205.1
PT00509
MIC03006_1
HG02934
Tcir_isotig07508
Oden_isotig17486
FE911603.1
Tcol_isotig09166
ACC00900_2
HGC00253_1
AW506200.1
FE911512.1
MI05064
OOC01686_1
GPC01453_1
ACC07877_1
ASC22372_1
GW406814.1
PPC02922_1
EX014430.1
FK670268.1
PSC02494_1
EX009354.1
HC01293
NB06472
CV199742.1
ES411678.1
Tcir_isotig12621
HBC00870_1
EX558063.1
Oden_isotig17487
SFC00007_1
AS01502
GP01840
EX007748.1
FG619138.1
TDC02907_1
Tcol_isotig09167
Acan_isotig04370
AW505790.1
CJC01404_1
HG03163
JI222631.1
Tcir_isotig01333
Name_isotig01402
CRC03127_1
EX011347.1
CJC01153_1
JO471977.1
CV200383.1
TV00376
ASC21123_1
Associated_featureWBsf658446
WBsf658447
WBsf222518
Experimental_infoRNAi_resultWBRNAi00051338Inferred_automaticallyRNAi_primary
WBRNAi00034637Inferred_automaticallyRNAi_primary
Expr_patternExpr1010923
Expr1034846
Expr1155031
Expr2012216
Expr2030452
Microarray_results (23)
Expression_cluster (107)
SAGE_tagSAGE:cgagatcgatatcgccgStrandSense
Unambiguously_mapped
SAGE:atggttcctgaccaccgStrandAntisense
SAGE:cgagatcgatStrandSense
Unambiguously_mapped
Interaction (114)
Map_infoMapIIPosition23.663
PositivePositive_cloneR05H10Inferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
ReferenceWBPaper00038491
WBPaper00042257
WBPaper00044578
WBPaper00045706
WBPaper00055090
WBPaper00060484
WBPaper00061220
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene