WormBase Tree Display for Gene: WBGene00011021

WBGene00011021 SMap: S_parent: Sequence: R05A10
  Identity: Version: 1
    Name: Sequence_name: R05A10.4
      Molecular_name: R05A10.4
        R05A10.4.1
        CE16290
      Other_name: CELE_R05A10.4 Accession_evidence: NDB BX284604
      Public_name: R05A10.4
    DB_info: Database: AceView gene 4O937
        WormQTL gene WBGene00011021
        WormFlux gene WBGene00011021
        NDB locus_tag CELE_R05A10.4
        NCBI gene 187595
        RefSeq protein NM_070317.3
        SwissProt UniProtAcc O45700
        TREEFAM TREEFAM_ID TF322439
        UniProt_GCRP UniProtAcc O45700
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:52 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
    Status: Live
  Gene_info: Biotype: SO:0001217
    Allele (20)
    RNASeq_FPKM (74)
    GO_annotation: 00035012
      00035013
    Ortholog: WBGene00037089 Caenorhabditis briggsae From_analysis: OrthoMCL
      WBGene00040932 Caenorhabditis briggsae From_analysis: OrthoMCL
            Inparanoid_8
      WBGene00040933 Caenorhabditis briggsae From_analysis: OrthoMCL
            Inparanoid_8
      WBGene00039197 Caenorhabditis briggsae From_analysis: OrthoMCL
      WBGene00156049 Caenorhabditis brenneri From_analysis: TreeFam
            Inparanoid_8
      WBGene00159612 Caenorhabditis brenneri From_analysis: TreeFam
            Inparanoid_8
      WBGene00080604 Caenorhabditis remanei From_analysis: TreeFam
            Inparanoid_8
      Sp34_40260600 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrIV_pilon.g12434 Caenorhabditis elegans From_analysis: WormBase-Compara
    Paralog: WBGene00012880 Caenorhabditis elegans From_analysis: TreeFam
            Inparanoid_8
      WBGene00012876 Caenorhabditis elegans From_analysis: TreeFam
            Inparanoid_8
      WBGene00045069 Caenorhabditis elegans From_analysis: TreeFam
    Structured_description: Automated_description: Predicted to be located in extracellular region. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: R05A10.4
    Corresponding_transcript: R05A10.4.1
    Associated_feature: WBsf646553
      WBsf229488
  Experimental_info: RNAi_result: WBRNAi00034591 Inferred_automatically: RNAi_primary
      WBRNAi00051258 Inferred_automatically: RNAi_primary
      WBRNAi00017418 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1016415
      Expr1154959
      Expr2005380
      Expr2023601
    Drives_construct: WBCnstr00030984
    Construct_product: WBCnstr00030984
    Microarray_results (17)
    Expression_cluster: WBPaper00037950:all-neurons_L1-larva_expressed
      WBPaper00037950:BAG-neuron_blastula-embryo_expressed
      WBPaper00037950:germline-precursors_blastula-embryo_expressed
      WBPaper00038438:E.faecalis_24hr_upregulated_TilingArray
      WBPaper00038438:Harposporium_24hr_upregulated_RNAseq
      WBPaper00038438:P.lumniescens_24hr_upregulated_TilingArray
      WBPaper00040560:hpl-2_L3_downregulated
      WBPaper00041954:ethanol_upregulated
      WBPaper00044736:flat_dev_expression
      WBPaper00044786:emr-1(RNAi);lem-2(tm1582)_upregulated
      WBPaper00045314:S.aureus-induced_N2
      WBPaper00045417:128Q-huntingtin_downreglated
      WBPaper00045934:wrn-1(gk99)_downregulated
      WBPaper00048971:daf-16(mgDf50)_downregulated_L1
      WBPaper00049489:AMsh-glia_enriched
      WBPaper00049736:daf-2(e1370)_upregulated_15deg-then-25deg(12hr)
      WBPaper00050344:PLM-neuron_enriched
      WBPaper00050488:20C_vs_25C_regulated_mir-34(OverExpression)_adult
      WBPaper00050488:20C_vs_25C_regulated_N2_adult
      WBPaper00050488:adult_vs_dauer_regulated_N2_20C
      WBPaper00050488:mir-34(gk437)_vs_mir-34(OverExpression)_regulated_adult_25C
      WBPaper00050488:mir-34(gk437)_vs_mir-34(OverExpression)_regulated_dauer_20C
      WBPaper00050488:mir-34(OverExpression)_vs_N2_regulated_adult_20C
      WBPaper00050488:N2_vs_mir-34(gk437)_regulated_dauer_20C
      WBPaper00050488:N2_vs_mir-34(OverExpression)_regulated_adult_25C
      WBPaper00050726:OsmoticStress_regulated_Food
      WBPaper00050726:OsmoticStress_regulated_NoFood
      WBPaper00050726:starvation_regulated_LowSalt
      WBPaper00050743:elli-1(sam-3)_downregulated
      WBPaper00050801:DAF-16_dauer_regulome
      WBPaper00050801:DPY-21_dauer_regulome
      WBPaper00050903:mir-35-41(nDf50)_25C_upregulated
      WBPaper00050990:hypodermis_enriched
      WBPaper00050990:hypodermis_expressed
      WBPaper00051437:Cit-SPIONs_downregulated
      WBPaper00052884:emb-4(hc60)_upregulated
      WBPaper00053606:N2_vs_elt-2(ca15)_downregulated
      WBPaper00053771:up_at_24h-NaCl
      WBPaper00053771:up_at_dpy-7(e88)
      WBPaper00053810:daf-2(e1370)_upregulated
      WBPaper00055354:Psora-Allantoin_downregulated
      WBPaper00055354:Rapamycin-Metformin_downregulated
      WBPaper00055354:Rapamycin-Rifampicin-Psora_upregulated
      WBPaper00055386:daf-2(e1370)_upregulated
      WBPaper00055626:pry-1(mu38)_upregulated
      WBPaper00055827:daf-2(e1370)_upregulated
      WBPaper00055971:nhl-2(ok818)_25C_downregulated
      WBPaper00056090:E.faecalis_upregulated_hpx-2(dg047)
      WBPaper00056090:E.faecalis_upregulated_N2
      WBPaper00057041:spc-1(cas971)_downregulated
      WBPaper00057041:unc-70(cas983)_downregulated
      WBPaper00058948:PA14_downregulated
      WBPaper00059027:neuron-synapses_depleted
      WBPaper00059117:B.subtilis_upregulated
      WBPaper00059253:sucrose_stearic-acid_upregulated
      WBPaper00059253:sucrose_upregulated
      WBPaper00059421:daf-1(m40)_upregulated
      WBPaper00059664:srbc-48(ac23)_upregulated
      WBPaper00059754:E.faecalis_OG1RF_upregulated
      WBPaper00060014:set-2(tm1630)_downregulated
      WBPaper00060358:B.thuringiensis_pathogen_regulated_elt-2(RNAi)
      WBPaper00060399:pqm-1(ok485)_upregulated_CoCl2_6hr
      WBPaper00060445:ikb-1(nr2027)_downregulated_L4
      WBPaper00060445:nfki-1(cer1)_downregulated_L4
      WBPaper00060909:atfs-1(cmh15)_downregulated
      WBPaper00061007:S.aquatilis_upregulated
      WBPaper00061081:E.faecalis_upregulated_N2
      WBPaper00061081:E.faecalis_upregulated_skpo-1(ok1640)
      WBPaper00061274:hypergravity_15xg_downregulated
      WBPaper00061340:AMsh
      WBPaper00061340:ant_arc_V
      WBPaper00061341:28C_24h_upregulated
      WBPaper00061341:28C_48h_upregulated
      WBPaper00061357:mett-10(ok2204)_upregulated_OP50
      WBPaper00061424:Diet_MYb120_upregulated
      WBPaper00061466:nath-10(icb102)_downregulated
      WBPaper00061527:T16H12.9-kin-9_20752
      WBPaper00061530:nhr-49(e2144)_downregulated
      WBPaper00061651:AMsh_enriched
      WBPaper00061651:PHsh_enriched
      WBPaper00061952:daf-18(nr2037)_downregulated
      WBPaper00061995:mter-4(syb3662syb3403)_downregulated
      WBPaper00062159:hda-2(ok1479)_upregulated
      WBPaper00062325:muscle_depleted_coding-RNA
      WBPaper00064088:Day-1-adult_vs_L4_downregulated_daf-16(mu86);glp-1(e2141)
      WBPaper00064088:Day-1-adult_vs_L4_downregulated_glp-1(e2141)
      WBPaper00064088:Day-3-adult_vs_L4_downregulated_daf-16(mu86);glp-1(e2141)
      WBPaper00064088:Day-3-adult_vs_L4_downregulated_fem-3(q20)
      WBPaper00064088:Day-3-adult_vs_L4_downregulated_glp-1(e2141)
      WBPaper00064632:daf-2(e1370)_upregulated_intestine
      WBPaper00064933:bcf-1(ylf1)_downregulated_transcript
      WBPaper00065096:25C_vs_20C_downregulated
      WBPaper00065096:Day10_vs_Day1_downregulated
      WBPaper00065096:npr-8(ok1439)_upregulated_Day1_25C
      WBPaper00065158:25C_vs_15C_upregulated_AFD
      WBPaper00065841:45_0
      WBPaper00065841:141_0
      WBPaper00065993:glp-1(e2141)_upregulated
      WBPaper00066062:xrep-4(lax137)_upregulated
      WBPaper00066110:Doxorubicin_upregulated_diploid
      WBPaper00066110:tetraploid_vs_diploid_upregulated
      WBPaper00066232:ash-2(RNAi)_downregulated_WT
      WBPaper00024393:strongly_regulated_dauer_genes
      WBPaper00030985:Serratia_marcesens_downregulated
      WBPaper00031184:acrylamide_upregulated
      WBPaper00031832:slr-2_regulated
      WBPaper00032948:StarveUp2
      WBPaper00035227:heat_shock_regulated
      WBPaper00039866:ClassComp_daf-19_downregulated
      WBPaper00041207:CE_dauer_up
      WBPaper00041939:control_vs_EtBr-exposed_48h
      WBPaper00041939:control_vs_UVC-EtBr-exposed_48h
      WBPaper00041939:control_vs_UVC-EtBr-exposed_51h
      WBPaper00041939:EtBr-exposed_vs_UVC-exposed_48h
      WBPaper00041939:UVC-EtBr-exposed_vs_EtBr-exposed_24h
      WBPaper00041939:UVC-EtBr-exposed_vs_EtBr-exposed_51h
      WBPaper00041939:UVC-EtBr-exposed_vs_UVC-exposed_48h
      WBPaper00042274:tbx-2(bx59)_upregulated
      WBPaper00042574:N2_OrsayVirus_downregulated
      WBPaper00044091:Bpseudomallei_induced_8h
      WBPaper00045960:L4-lethargus_upregulated
      WBPaper00047070:N2_starvation_upregulated
      WBPaper00053236:daf-16(mgDF50)_regulated_Starved
      WBPaper00053236:Starvation_regulated_GR1307
      WBPaper00053236:Starvation_regulated_N2
      WBPaper00053550:daf-19(m86)_downregulated_3-fold-embryo
      WBPaper00053688:E.faecalis_upregulated
      WBPaper00055899:nitroguanidine_regulated
    Interaction (71)
  Map_info: Positive: Positive_clone: R05A10 Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: IV 11.4986
  Method: Gene