WormBase Tree Display for Gene: WBGene00012876
expand all nodes | collapse all nodes | view schema
| WBGene00012876 | SMap | S_parent | Sequence | Y45F10B | ||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | ||||||||
| Name | Sequence_name | Y45F10B.15 | ||||||||
| Molecular_name | Y45F10B.15 | |||||||||
| Other_name | CELE_Y45F10B.15 | Accession_evidence | NDB | BX284604 | ||||||
| Public_name | Y45F10B.15 | |||||||||
| DB_info | Database | AceView | gene | 4O369 | ||||||
| WormQTL | gene | WBGene00012876 | ||||||||
| WormFlux | gene | WBGene00012876 | ||||||||
| NDB | locus_tag | CELE_Y45F10B.15 | ||||||||
| NCBI | gene | 3565190 | ||||||||
| Species | Caenorhabditis elegans | |||||||||
| History | Version_change | 1 | 26 May 2004 16:54:54 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | |||
| 2 | 28 May 2014 11:58:06 | WBPerson4025 | Event | Changed_class | CDS | Pseudogene | ||||
| Status | Live | |||||||||
| Gene_info | Biotype | SO:0000336 | ||||||||
| Allele (19) | ||||||||||
| RNASeq_FPKM (74) | ||||||||||
| Ortholog | WBGene00037089 | Caenorhabditis briggsae | From_analysis | OrthoMCL | ||||||
| WBGene00040932 | Caenorhabditis briggsae | From_analysis | OrthoMCL | |||||||
| WBGene00040933 | Caenorhabditis briggsae | From_analysis | OrthoMCL | |||||||
| WBGene00039197 | Caenorhabditis briggsae | From_analysis | OrthoMCL | |||||||
| WBGene00156049 | Caenorhabditis brenneri | From_analysis | TreeFam | |||||||
| Inparanoid_8 | ||||||||||
| WBGene00159612 | Caenorhabditis brenneri | From_analysis | TreeFam | |||||||
| Inparanoid_8 | ||||||||||
| WBGene00080604 | Caenorhabditis remanei | From_analysis | TreeFam | |||||||
| Inparanoid_8 | ||||||||||
| Paralog | WBGene00011021 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Inparanoid_8 | ||||||||||
| WBGene00012880 | Caenorhabditis elegans | From_analysis | TreeFam | |||||||
| Inparanoid_8 | ||||||||||
| WBGene00045069 | Caenorhabditis elegans | From_analysis | TreeFam | |||||||
| Structured_description | Automated_description | Is affected by several genes including pgl-1; aak-2; and glh-1 based on tiling array and RNA-seq studies. Is affected by five chemicals including Psoralens; allantoin; and Rifampin based on RNA-seq studies. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | |||||||||
| WBPerson37462 | ||||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | |||||||||
| Molecular_info | Corresponding_CDS_history | Y45F10B.15:wp243 | ||||||||
| Corresponding_pseudogene | Y45F10B.15 | |||||||||
| Associated_feature | WBsf998436 | |||||||||
| WBsf1018554 | ||||||||||
| Experimental_info | Expr_pattern | Expr1023598 | ||||||||
| Expr1160049 | ||||||||||
| Microarray_results | GPL13394_WBGene00012876 | |||||||||
| GPL13914_Y45F10B.15 | ||||||||||
| GPL14144_Y45F10B.15_190-249_0.953_1_A | ||||||||||
| GPL19516_CGZ0046483 | ||||||||||
| GPL21109_Y45F10B.15 | ||||||||||
| GPL8304_CE_WBGene00012876_A | ||||||||||
| GPL8673_Y45F10B_15P00041 | ||||||||||
| Expression_cluster (25) | ||||||||||
| Map_info | Positive | Positive_clone | Y45F10B | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Interpolated_map_position | IV | 10.2037 | ||||||||
| Method | Gene |
