WormBase Tree Display for Gene: WBGene00039197

WBGene00039197 SMap: S_parent: Sequence: cb25.fpc4153
  Identity: Version: 2
    Name: Sequence_name: CBG20137
      Molecular_name: CBG20137
      Other_name: CBG_20137 Accession_evidence: NDB HE601175
      Public_name: CBG20137
    DB_info: Database: NDB locus_tag CBG_20137
    Species: Caenorhabditis briggsae
    History: Version_change: 1 08 Sep 2004 10:52:09 WBPerson1971 Event: Imported: Initial conversion from brigace
        2 24 Jul 2008 11:56:33 WBPerson1847 Event: Acquires_merge: WBGene00039198
      Acquires_merge: WBGene00039198
    Status: Live
  Gene_info: Biotype: SO:0000336
    RNASeq_FPKM: WBls:0000002 0.155395 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
        0.514787 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
        0.661767 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
        0.727199 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
        0.498747 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
        0.510777 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
        0.580257 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
      WBls:0000003 4.33485 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
        6.1012 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
            RNASeq.briggsae.WBls:0000003.control_median
        7.86756 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
        4.71511 From_analysis: RNASeq.briggsae.WBls:0000003.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
        5.63917 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
      WBls:0000004 2.78809 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
        3.32907 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
            RNASeq.briggsae.WBls:0000004.control_median
        3.87004 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
            RNASeq.briggsae.WBls:0000004.control_median
        3.27371 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
        3.64969 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
        3.87645 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
        4.44015 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
      WBls:0000024 (12)
      WBls:0000027 0.030689 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
        0.182404 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
        0.235675 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
        0.493932 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
        0.338168 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
        0.556204 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
        1.51779 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
      WBls:0000035 1.67726 From_analysis: RNASeq.briggsae.WBls:0000035.control_mean
            RNASeq.briggsae.WBls:0000035.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
      WBls:0000038 0.188283 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
        0.993813 From_analysis: RNASeq.briggsae.WBls:0000038.control_mean
        1.08662 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
        1.13663 From_analysis: RNASeq.briggsae.WBls:0000038.control_median
        1.18665 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
        1.5137 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
      WBls:0000041 0.344097 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
        0.464153 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
        0.509318 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
        0.554483 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
        0.595038 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        1.01742 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
        0.59273 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
        0.630977 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
        0.682692 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        1.08502 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
      WBls:0000063 0.247711 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
        0.277826 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
        0.302611 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
        0.658118 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
        0 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
            RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
        0.290219 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
        0.294725 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
        0.529797 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
      WBls:0000101 0.6176 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        1.13138 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
        0.659943 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        1.40468 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
    Ortholog (13)
    Structured_description: Automated_description: Is affected by Cbr-spr-4 based on RNA-seq studies. Is an ortholog of C. elegans K02E2.6; R05A10.4; and Y45F10B.15. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS_history: CBG20137:bp194
      CBG20137:bp265
    Corresponding_pseudogene: CBG20137
  Experimental_info: Expr_pattern: Expr1066489
    Microarray_results: GPL8303_CB6_WBGene00039198_A
      GPL14143_CBG16472_1213-1272_0.944_4_C
      GPL14143_CBG16472_1239-1298_0.944_3_B
      GPL14143_CBG16472_1353-1412_0.957_1_A
    Expression_cluster: WBPaper00059178:Cbr-spr-4(gu163)_upregulated
  Method: Gene