Questions, Feedback & Help
Send us an email and we'll get back to you ASAP. Or you can read our Frequently Asked Questions.

WormBase Tree Display for Gene: WBGene00010988

expand all nodes | collapse all nodes | view schema

Name Class

WBGene00010988SMapS_parentSequenceR03D7
IdentityVersion2
NameCGC_namemetr-1Person_evidenceWBPerson1711
Sequence_nameR03D7.1
Molecular_nameR03D7.1
R03D7.1.1
CE01609
Other_nameCELE_R03D7.1Accession_evidenceNDBBX284602
Public_namemetr-1
DB_infoDatabase (13)
SpeciesCaenorhabditis elegans
HistoryVersion_change126 May 2004 16:54:52WBPerson1971EventImportedInitial conversion from CDS class of WS125
220 Apr 2011 10:05:24WBPerson2970Name_changeCGC_namemetr-1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classmetr
Allele (55)
StrainWBStrain00001842
WBStrain00002165
WBStrain00031469
RNASeq_FPKM (74)
GO_annotation (23)
Ortholog (39)
ParalogWBGene00015512Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00020491Caenorhabditis elegansFrom_analysisWormBase-Compara
Structured_descriptionConcise_descriptionmetr-1 encodes a protein orthologous to the human gene Methionine synthase (MTR), which is involved in the conversion of homocysteine to form methionine.Paper_evidenceWBPaper00042203
Curator_confirmedWBPerson324
WBPerson1823
WBPerson567
Date_last_updated07 May 2013 00:00:00
Automated_descriptionPredicted to enable methionine synthase activity. Predicted to be involved in homocysteine metabolic process; methionine biosynthetic process; and tetrahydrofolate metabolic process. Predicted to be located in cytosol. Used to study type 2 diabetes mellitus. Human ortholog(s) of this gene implicated in several diseases, including IgA glomerulonephritis; autistic disorder; and hematologic cancer (multiple). Is an ortholog of human MTR (5-methyltetrahydrofolate-homocysteine methyltransferase).Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Disease_infoExperimental_modelDOID:9352Homo sapiensPaper_evidenceWBPaper00042203
Curator_confirmedWBPerson324
Date_last_updated13 Mar 2023 00:00:00
Potential_model (14)
Models_disease_assertedWBDOannot00000175
Molecular_infoCorresponding_CDSR03D7.1
Corresponding_transcriptR03D7.1.1
Other_sequence (51)
Associated_featureWBsf222084
WBsf222085
Experimental_infoRNAi_resultWBRNAi00071221Inferred_automaticallyRNAi_primary
WBRNAi00034551Inferred_automaticallyRNAi_primary
WBRNAi00090587Inferred_automaticallyRNAi_primary
WBRNAi00051170Inferred_automaticallyRNAi_primary
WBRNAi00106971Inferred_automaticallyRNAi_primary
WBRNAi00017346Inferred_automaticallyRNAi_primary
Expr_patternChronogram417
Chronogram1093
Expr6447
Expr6448
Expr1028258
Expr1034818
Expr1154877
Expr2013538
Expr2031772
Drives_constructWBCnstr00002636
WBCnstr00004383
Regulate_expr_clusterWBPaper00060951:metr-1(os521)_downregulated
WBPaper00060951:metr-1(os521)_upregulated
Microarray_results (20)
Expression_cluster (213)
InteractionWBInteraction000029521
WBInteraction000139692
WBInteraction000139707
WBInteraction000139725
WBInteraction000139744
WBInteraction000139853
WBInteraction000139966
WBInteraction000139969
WBInteraction000140004
WBInteraction000140018
WBInteraction000140019
WBInteraction000140056
WBInteraction000140065
WBInteraction000140073
WBInteraction000140082
WBInteraction000140094
WBInteraction000140210
WBInteraction000140218
WBInteraction000140253
WBInteraction000140292
WBInteraction000140337
WBInteraction000140379
WBInteraction000140425
WBInteraction000140426
WBInteraction000140439
WBInteraction000140571
WBInteraction000140742
WBInteraction000140761
WBInteraction000140762
WBInteraction000141105
WBInteraction000141106
WBInteraction000141211
WBInteraction000141977
WBInteraction000144448
WBInteraction000144449
WBInteraction000145044
WBInteraction000146230
WBInteraction000146231
WBInteraction000147297
WBInteraction000149035
WBInteraction000149244
WBInteraction000150590
WBInteraction000151662
WBInteraction000155281
WBInteraction000155653
WBInteraction000155654
WBInteraction000155883
WBInteraction000155885
WBInteraction000156331
WBInteraction000156932
WBInteraction000161881
WBInteraction000164076
WBInteraction000164766
WBInteraction000164823
WBInteraction000168158
WBInteraction000168863
WBInteraction000177954
WBInteraction000177955
WBInteraction000177956
WBInteraction000177957
WBInteraction000177958
WBInteraction000177959
WBInteraction000177960
WBInteraction000182037
WBInteraction000182374
WBInteraction000191914
WBInteraction000191999
WBInteraction000194416
WBInteraction000204182
WBInteraction000213313
WBInteraction000213578
WBInteraction000216623
WBInteraction000219391
WBInteraction000229683
WBInteraction000237129
WBInteraction000240069
WBInteraction000240129
WBInteraction000251115
WBInteraction000255863
WBInteraction000257223
WBInteraction000268153
WBInteraction000271506
WBInteraction000278414
WBInteraction000281395
WBInteraction000284288
WBInteraction000285240
WBInteraction000287813
WBInteraction000337257
WBInteraction000361238
WBInteraction000378969
WBInteraction000384522
WBInteraction000512478
WBInteraction000512484
WBInteraction000534942
WBInteraction000534943
WBInteraction000558444
WBInteraction000558702
WBInteraction000564052
WBInteraction000565721
WBInteraction000565958
WBInteraction000567001
WBInteraction000568188
WBInteraction000574888
WBInteraction000575708
WBInteraction000576075
WBInteraction000576597
WBInteraction000577024
WBInteraction000577160
WBInteraction000583270
WBInteraction000584268
Map_infoMapIIPosition3.13342Error0.000132
PositivePositive_cloneR03D7Inferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
Reference (25)
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene