WormBase Tree Display for Gene: WBGene00010621

WBGene00010621 SMap: S_parent: Sequence: K07A12
  Identity: Version: 2
    Name: CGC_name: egg-6 Person_evidence: WBPerson597
      Sequence_name: K07A12.2
      Molecular_name: K07A12.2
        K07A12.2.1
        CE11866
      Other_name: CELE_K07A12.2 Accession_evidence: NDB BX284601
      Public_name: egg-6
    DB_info: Database: AceView gene 1J254
        WormQTL gene WBGene00010621
        WormFlux gene WBGene00010621
        NDB locus_tag CELE_K07A12.2
        Panther gene CAEEL|WormBase=WBGene00010621|UniProtKB=P90920
          family PTHR45617
        NCBI gene 172670
        RefSeq protein NM_059947.6
        SwissProt UniProtAcc P90920
        UniProt_GCRP UniProtAcc P90920
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:51 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 12 Aug 2011 13:38:18 WBPerson2970 Name_change: CGC_name: egg-6
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: egg
    Allele (59)
    Strain: WBStrain00036254
    RNASeq_FPKM (74)
    GO_annotation: 00049503
      00049504
      00049505
    Ortholog (25)
    Paralog (12)
    Structured_description: Concise_description: egg-6 encodes an extracellular leucine-rich repeat protein; egg-6 is required for proper organization of the apical extracellular matrix. Paper_evidence: WBPaper00040698
          Curator_confirmed: WBPerson1843
          Date_last_updated: 27 Jan 2012 00:00:00
      Automated_description: Predicted to be located in apical plasma membrane. Expressed in excretory system; neurons; pharynx; rectal epithelial cell; and vulva. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: K07A12.2
    Corresponding_transcript: K07A12.2.1
    Other_sequence (31)
    Associated_feature (18)
  Experimental_info: RNAi_result: WBRNAi00003949 Inferred_automatically: RNAi_primary
      WBRNAi00025894 Inferred_automatically: RNAi_primary
      WBRNAi00085833 Inferred_automatically: RNAi_primary
      WBRNAi00025895 Inferred_automatically: RNAi_primary
      WBRNAi00000335 Inferred_automatically: RNAi_primary
      WBRNAi00034037 Inferred_automatically: RNAi_primary
      WBRNAi00050096 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr9900
      Expr9949
      Expr1010463
      Expr1034639
      Expr1153798
      Expr2011204
      Expr2029440
    Drives_construct: WBCnstr00014386
      WBCnstr00031280
    Construct_product: WBCnstr00010001
      WBCnstr00014386
      WBCnstr00031280
    Microarray_results (19)
    Expression_cluster (201)
    Interaction (101)
  Map_info: Map: I Position: 3.01725 Error: 9.1e-05
    Positive: Positive_clone: K07A12 Inferred_automatically: From sequence, transcript, pseudogene data
    Mapping_data: Multi_point: 5734
        5735
      Pos_neg_data: 10959
        10960
        10961
        10962
        10963
        10964
        10965
    Pseudo_map_position
  Reference: WBPaper00038651
    WBPaper00040698
    WBPaper00042709
    WBPaper00048267
    WBPaper00055090
    WBPaper00061137
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene