WormBase Tree Display for Gene: WBGene00010621

WBGene00010621 SMap: S_parent: Sequence: K07A12
  Identity: Version: 2
    Name: CGC_name: egg-6 Person_evidence: WBPerson597
      Sequence_name: K07A12.2
      Molecular_name: K07A12.2
        K07A12.2.1
        CE11866
      Other_name: CELE_K07A12.2 Accession_evidence: NDB BX284601
      Public_name: egg-6
    DB_info: Database: AceView gene 1J254
        WormQTL gene WBGene00010621
        WormFlux gene WBGene00010621
        NDB locus_tag CELE_K07A12.2
        Panther gene CAEEL|WormBase=WBGene00010621|UniProtKB=P90920
          family PTHR45617
        NCBI gene 172670
        RefSeq protein NM_059947.6
        SwissProt UniProtAcc P90920
        UniProt_GCRP UniProtAcc P90920
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:51 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 12 Aug 2011 13:38:18 WBPerson2970 Name_change: CGC_name: egg-6
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: egg
    Allele (59)
    Strain: WBStrain00036254
    RNASeq_FPKM (74)
    GO_annotation: 00049503
      00049504
      00049505
    Ortholog (25)
    Paralog (12)
    Structured_description: Concise_description: egg-6 encodes an extracellular leucine-rich repeat protein; egg-6 is required for proper organization of the apical extracellular matrix. Paper_evidence: WBPaper00040698
          Curator_confirmed: WBPerson1843
          Date_last_updated: 27 Jan 2012 00:00:00
      Automated_description: Predicted to be located in apical plasma membrane. Expressed in excretory system; neurons; pharynx; rectal epithelial cell; and vulva. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: K07A12.2
    Corresponding_transcript: K07A12.2.1
    Other_sequence (31)
    Associated_feature (18)
  Experimental_info: RNAi_result: WBRNAi00003949 Inferred_automatically: RNAi_primary
      WBRNAi00025894 Inferred_automatically: RNAi_primary
      WBRNAi00085833 Inferred_automatically: RNAi_primary
      WBRNAi00025895 Inferred_automatically: RNAi_primary
      WBRNAi00000335 Inferred_automatically: RNAi_primary
      WBRNAi00034037 Inferred_automatically: RNAi_primary
      WBRNAi00050096 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr9900
      Expr9949
      Expr1010463
      Expr1034639
      Expr1153798
      Expr2011204
      Expr2029440
    Drives_construct: WBCnstr00014386
      WBCnstr00031280
    Construct_product: WBCnstr00010001
      WBCnstr00014386
      WBCnstr00031280
    Microarray_results (19)
    Expression_cluster (201)
    Interaction: WBInteraction000147414
      WBInteraction000152298
      WBInteraction000152681
      WBInteraction000155579
      WBInteraction000173169
      WBInteraction000174284
      WBInteraction000175042
      WBInteraction000179663
      WBInteraction000196385
      WBInteraction000204639
      WBInteraction000212238
      WBInteraction000212938
      WBInteraction000215459
      WBInteraction000215892
      WBInteraction000217761
      WBInteraction000222629
      WBInteraction000223083
      WBInteraction000224201
      WBInteraction000235168
      WBInteraction000239177
      WBInteraction000242223
      WBInteraction000244428
      WBInteraction000246064
      WBInteraction000247739
      WBInteraction000249627
      WBInteraction000251018
      WBInteraction000258156
      WBInteraction000269833
      WBInteraction000270048
      WBInteraction000271121
      WBInteraction000277675
      WBInteraction000284738
      WBInteraction000286036
      WBInteraction000287931
      WBInteraction000289060
      WBInteraction000291469
      WBInteraction000310197
      WBInteraction000315374
      WBInteraction000315699
      WBInteraction000315876
      WBInteraction000316044
      WBInteraction000317451
      WBInteraction000327149
      WBInteraction000329043
      WBInteraction000330264
      WBInteraction000330670
      WBInteraction000332318
      WBInteraction000349570
      WBInteraction000349650
      WBInteraction000355332
      WBInteraction000356894
      WBInteraction000358651
      WBInteraction000359480
      WBInteraction000360095
      WBInteraction000362415
      WBInteraction000363103
      WBInteraction000363336
      WBInteraction000365727
      WBInteraction000366695
      WBInteraction000369811
      WBInteraction000372718
      WBInteraction000374218
      WBInteraction000376408
      WBInteraction000378429
      WBInteraction000380700
      WBInteraction000381179
      WBInteraction000381405
      WBInteraction000381743
      WBInteraction000385172
      WBInteraction000386105
      WBInteraction000386270
      WBInteraction000388854
      WBInteraction000389050
      WBInteraction000389868
      WBInteraction000390268
      WBInteraction000391569
      WBInteraction000391935
      WBInteraction000396894
      WBInteraction000397063
      WBInteraction000397718
      WBInteraction000399615
      WBInteraction000408794
      WBInteraction000409049
      WBInteraction000412183
      WBInteraction000420723
      WBInteraction000425390
      WBInteraction000428384
      WBInteraction000435063
      WBInteraction000439639
      WBInteraction000439814
      WBInteraction000440169
      WBInteraction000441267
      WBInteraction000443414
      WBInteraction000448740
      WBInteraction000449162
      WBInteraction000449943
      WBInteraction000451303
      WBInteraction000452212
      WBInteraction000452976
      WBInteraction000453577
      WBInteraction000462254
  Map_info: Map: I Position: 3.01725 Error: 9.1e-05
    Positive: Positive_clone: K07A12 Inferred_automatically: From sequence, transcript, pseudogene data
    Mapping_data: Multi_point: 5734
        5735
      Pos_neg_data: 10959
        10960
        10961
        10962
        10963
        10964
        10965
    Pseudo_map_position
  Reference: WBPaper00038651
    WBPaper00040698
    WBPaper00042709
    WBPaper00048267
    WBPaper00055090
    WBPaper00061137
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene