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WormBase Tree Display for Gene: WBGene00010470

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Name Class

WBGene00010470SMapS_parentSequenceK01D12
IdentityVersion2
NameCGC_namecdr-4Person_evidenceWBPerson184
Sequence_nameK01D12.11
Molecular_nameK01D12.11
K01D12.11.1
CE06050
Other_nameCELE_K01D12.11Accession_evidenceNDBBX284605
Public_namecdr-4
DB_infoDatabaseAceViewgene5M886
WormQTLgeneWBGene00010470
WormFluxgeneWBGene00010470
NDBlocus_tagCELE_K01D12.11
PanthergeneCAEEL|WormBase=WBGene00010470|UniProtKB=G5EDZ7
familyPTHR12289
NCBIgene259654
RefSeqproteinNM_073709.7
TREEFAMTREEFAM_IDTF314915
TrEMBLUniProtAccG5EDZ7
UniProt_GCRPUniProtAccG5EDZ7
SpeciesCaenorhabditis elegans
HistoryVersion_change126 May 2004 16:54:51WBPerson1971EventImportedInitial conversion from CDS class of WS125
208 Nov 2004 10:09:27WBPerson2970Name_changeCGC_namecdr-4
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classcdr
Allele (23)
StrainWBStrain00031607
WBStrain00031676
RNASeq_FPKM (74)
GO_annotation00015092
00015093
00015094
00015095
00015096
00105659
OrthologWBGene00052531Caenorhabditis remaneiFrom_analysisOMA
WBGene00131988Caenorhabditis japonicaFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
WBGene00194483Caenorhabditis brenneriFrom_analysisTreeFam
WBGene00109500Pristionchus pacificusFrom_analysisInparanoid_8
WBGene00106431Pristionchus pacificusFrom_analysisInparanoid_8
WormBase-Compara
WBGene00106436Pristionchus pacificusFrom_analysisInparanoid_8
WormBase-Compara
WBGene00092927Pristionchus pacificusFrom_analysisOMA
WBGene00100936Pristionchus pacificusFrom_analysisInparanoid_8
WormBase-Compara
CBOVI.g865Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g8565Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP21.g8566Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP21.g8567Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP28.g5013Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP31.g1056Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP31.g6660Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP38.g10083Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP38.g13445Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP38.g8950Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP38.g8951Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP38.g8952Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP38.g8953Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP38.g8954Caenorhabditis quiockensisFrom_analysisWormBase-Compara
Cang_2012_03_13_00184.g6465Caenorhabditis angariaFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g01436Oscheius tipulaeFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g08548Oscheius tipulaeFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g10255Oscheius tipulaeFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g13920Oscheius tipulaeFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g13921Oscheius tipulaeFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g13922Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g7461Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_50170700Caenorhabditis inopinataFrom_analysisWormBase-Compara
Sp34_50170800Caenorhabditis inopinataFrom_analysisWormBase-Compara
Sp34_50301900Caenorhabditis inopinataFrom_analysisWormBase-Compara
chrV_pilon.g16006Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00105058Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00109501Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00110985Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00279003Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00279076Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00279147Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00279440Pristionchus pacificusFrom_analysisWormBase-Compara
ZFIN:ZDB-GENE-100922-19Danio rerioFrom_analysisEnsEMBL-Compara
OrthoFinder
Panther
PhylomeDB
MGI:1923382Mus musculusFrom_analysisEnsEMBL-Compara
OrthoFinder
Panther
RGD:1562449Rattus norvegicusFrom_analysisEnsEMBL-Compara
OrthoFinder
Panther
Paralog (12)
Structured_descriptionConcise_descriptioncdr-4 encodes a predicted transmembrane protein that is a member of the CDR (cadmium responsive) family of proteins; cdr-4 expression is upregulated in response to cadmium treatment.Paper_evidenceWBPaper00024695
Curator_confirmedWBPerson1843
Date_last_updated15 Apr 2014 00:00:00
Automated_descriptionInvolved in stress response to cadmium ion. Acts upstream of or within IRE1-mediated unfolded protein response. Located in lysosome. Expressed in pm5; pm6; and pm7.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSK01D12.11
Corresponding_transcriptK01D12.11.1
Associated_featureWBsf669504
WBsf982014
WBsf234673
Experimental_infoRNAi_result (12)
Expr_patternExpr4094
Expr7891
Expr1020804
Expr1153344
Expr2009824
Expr2028064
Drives_constructWBCnstr00012972
WBCnstr00031395
Construct_productWBCnstr00012972
WBCnstr00031395
Microarray_results (18)
Expression_cluster (399)
Interaction (14)
Map_infoMapVPosition4.11942Error0.00968
PositivePositive_cloneK01D12Inferred_automaticallyFrom sequence, transcript, pseudogene data
Mapping_dataMulti_point5540
Pseudo_map_position
ReferenceWBPaper00005432
WBPaper00024695
WBPaper00031378
WBPaper00035429
WBPaper00038491
WBPaper00040135
WBPaper00055090
WBPaper00058665
WBPaper00062289
WBPaper00065331
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene