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WormBase Tree Display for Gene: WBGene00010425

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Name Class

WBGene00010425SMapS_parentSequenceH37A05
IdentityVersion2
NameCGC_namelpin-1Person_evidenceWBPerson8432
Sequence_nameH37A05.1
Molecular_nameH37A05.1
H37A05.1.1
CE46619
Other_nameCELE_H37A05.1Accession_evidenceNDBBX284605
Public_namelpin-1
DB_infoDatabaseAceViewgene5O132
WormQTLgeneWBGene00010425
WormFluxgeneWBGene00010425
NDBlocus_tagCELE_H37A05.1
PanthergeneCAEEL|WormBase=WBGene00010425|UniProtKB=Q9XXT5
familyPTHR12181
NCBIgene179853
RefSeqproteinNM_073979.7
TREEFAMTREEFAM_IDTF314095
TrEMBLUniProtAccQ9XXT5
UniProt_GCRPUniProtAccQ9XXT5
SpeciesCaenorhabditis elegans
HistoryVersion_change126 May 2004 16:54:51WBPerson1971EventImportedInitial conversion from CDS class of WS125
215 Sep 2008 11:24:05WBPerson2970Name_changeCGC_namelpin-1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classlpin
Allele (56)
StrainWBStrain00001552
WBStrain00029193
WBStrain00029194
WBStrain00037085
WBStrain00053909
RNASeq_FPKM (74)
GO_annotation (26)
Ortholog (49)
Structured_descriptionConcise_descriptionlpin-1 encodes a putative phosphatidic acid phosphatase orthologous tobudding yeast PAH1 and human LPIN1 (OMIM:605518), LPIN2 (OMIM:605519,mutated in Majeed syndrome), and LPIN3 (OMIM:605520); lpin-1 isexpressed in vulval muscle; in mass RNAi assays, lpin-1 is requiredfor the osmotic integrity of eggs and for normal larval growth, bodythickness, locomotion, and fertility; by orthology, LPIN-1 is expectedto be dephosphorylated by SCPL-2.Paper_evidenceWBPaper00005654
WBPaper00006525
WBPaper00024497
WBPaper00025054
WBPaper00029274
WBPaper00029281
WBPaper00029282
WBPaper00029283
WBPaper00029284
Curator_confirmedWBPerson1843
WBPerson567
Date_last_updated17 Jun 2009 00:00:00
Automated_descriptionPredicted to enable phosphatidate phosphatase activity and transcription coactivator activity. Involved in several processes, including endomembrane system organization; macromolecule localization; and nematode larval development. Located in endoplasmic reticulum; nuclear envelope; and nucleoplasm. Expressed in head neurons and hypodermis. Used to study obesity. Human ortholog(s) of this gene implicated in morbid obesity. Is an ortholog of human LPIN2 (lipin 2).Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Disease_infoExperimental_modelDOID:9970Homo sapiensPaper_evidenceWBPaper00033438
Curator_confirmedWBPerson38202
Date_last_updated11 Jun 2018 00:00:00
Potential_modelDOID:11981Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:13345)
Models_disease_assertedWBDOannot00000542
Molecular_infoCorresponding_CDSH37A05.1
Corresponding_CDS_historyH37A05.1:wp229
Corresponding_transcriptH37A05.1.1
Other_sequence (51)
Associated_feature (20)
Experimental_infoRNAi_resultWBRNAi00080924Inferred_automaticallyRNAi_primary
WBRNAi00111106Inferred_automaticallyRNAi_primary
WBRNAi00080841Inferred_automaticallyRNAi_primary
WBRNAi00080927Inferred_automaticallyRNAi_primary
WBRNAi00116421Inferred_automaticallyRNAi_primary
WBRNAi00080917Inferred_automaticallyRNAi_primary
WBRNAi00080837Inferred_automaticallyRNAi_primary
WBRNAi00080928Inferred_automaticallyRNAi_primary
WBRNAi00080849Inferred_automaticallyRNAi_primary
WBRNAi00080922Inferred_automaticallyRNAi_primary
WBRNAi00080838Inferred_automaticallyRNAi_primary
WBRNAi00071589Inferred_automaticallyRNAi_primary
WBRNAi00090842Inferred_automaticallyRNAi_primary
WBRNAi00080923Inferred_automaticallyRNAi_primary
WBRNAi00080932Inferred_automaticallyRNAi_primary
WBRNAi00080835Inferred_automaticallyRNAi_primary
WBRNAi00106035Inferred_automaticallyRNAi_primary
WBRNAi00080926Inferred_automaticallyRNAi_primary
WBRNAi00080834Inferred_automaticallyRNAi_primary
WBRNAi00080840Inferred_automaticallyRNAi_primary
WBRNAi00106799Inferred_automaticallyRNAi_primary
WBRNAi00085625Inferred_automaticallyRNAi_primary
WBRNAi00102769Inferred_automaticallyRNAi_primary
WBRNAi00080836Inferred_automaticallyRNAi_primary
WBRNAi00000191Inferred_automaticallyRNAi_primary
WBRNAi00080831Inferred_automaticallyRNAi_primary
WBRNAi00049542Inferred_automaticallyRNAi_primary
WBRNAi00080918Inferred_automaticallyRNAi_primary
WBRNAi00080942Inferred_automaticallyRNAi_primary
WBRNAi00080919Inferred_automaticallyRNAi_primary
WBRNAi00080921Inferred_automaticallyRNAi_primary
WBRNAi00080931Inferred_automaticallyRNAi_primary
WBRNAi00080936Inferred_automaticallyRNAi_primary
WBRNAi00008933Inferred_automaticallyRNAi_primary
WBRNAi00080940Inferred_automaticallyRNAi_primary
WBRNAi00080830Inferred_automaticallyRNAi_primary
WBRNAi00080937Inferred_automaticallyRNAi_primary
WBRNAi00080934Inferred_automaticallyRNAi_primary
WBRNAi00080925Inferred_automaticallyRNAi_primary
WBRNAi00080848Inferred_automaticallyRNAi_primary
WBRNAi00080933Inferred_automaticallyRNAi_primary
WBRNAi00086025Inferred_automaticallyRNAi_primary
WBRNAi00080935Inferred_automaticallyRNAi_primary
WBRNAi00080930Inferred_automaticallyRNAi_primary
WBRNAi00080846Inferred_automaticallyRNAi_primary
WBRNAi00080850Inferred_automaticallyRNAi_primary
WBRNAi00080939Inferred_automaticallyRNAi_primary
WBRNAi00080833Inferred_automaticallyRNAi_primary
WBRNAi00091141Inferred_automaticallyRNAi_primary
WBRNAi00105938Inferred_automaticallyRNAi_primary
WBRNAi00080847Inferred_automaticallyRNAi_primary
WBRNAi00080844Inferred_automaticallyRNAi_primary
WBRNAi00091138Inferred_automaticallyRNAi_primary
WBRNAi00071647Inferred_automaticallyRNAi_primary
WBRNAi00080845Inferred_automaticallyRNAi_primary
WBRNAi00091140Inferred_automaticallyRNAi_primary
WBRNAi00091139Inferred_automaticallyRNAi_primary
WBRNAi00080842Inferred_automaticallyRNAi_primary
WBRNAi00080929Inferred_automaticallyRNAi_primary
WBRNAi00033778Inferred_automaticallyRNAi_primary
WBRNAi00080920Inferred_automaticallyRNAi_primary
WBRNAi00080941Inferred_automaticallyRNAi_primary
WBRNAi00080839Inferred_automaticallyRNAi_primary
WBRNAi00080829Inferred_automaticallyRNAi_primary
WBRNAi00080843Inferred_automaticallyRNAi_primary
Expr_patternChronogram1159
Expr6290
Expr8650
Expr8695
Expr11676
Expr1026973
Expr1034547
Expr1153265
Expr2013257
Expr2031488
Drives_constructWBCnstr00002394
WBCnstr00013464
WBCnstr00015871
WBCnstr00015872
Construct_productWBCnstr00013464
WBCnstr00015871
WBCnstr00019172
AntibodyWBAntibody00001937
WBAntibody00001938
WBAntibody00001939
WBAntibody00001940
WBAntibody00002523
Microarray_results (22)
Expression_cluster (127)
Interaction (15)
Map_infoMapVPosition5.54896Error0.007081
PositivePositive_cloneH37A05Inferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
ReferenceWBPaper00033438
WBPaper00033439
WBPaper00038491
WBPaper00040466
WBPaper00042257
WBPaper00045023
WBPaper00047716
WBPaper00051953
WBPaper00055090
WBPaper00059735
WBPaper00062852
WBPaper00064071
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene