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WormBase Tree Display for Gene: WBGene00010123

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Name Class

WBGene00010123SMapS_parentSequenceF55G11
IdentityVersion1
NameSequence_nameF55G11.2
Molecular_nameF55G11.2
F55G11.2.1
CE18748
Other_nameCELE_F55G11.2Accession_evidenceNDBBX284604
Public_nameF55G11.2
DB_infoDatabaseAceViewgene4N732
WormQTLgeneWBGene00010123
WormFluxgeneWBGene00010123
NDBlocus_tagCELE_F55G11.2
PanthergeneCAEEL|WormBase=WBGene00010123|UniProtKB=Q9XUD8
familyPTHR47155
NCBIgene186337
RefSeqproteinNM_070082.5
TREEFAMTREEFAM_IDTF316078
TrEMBLUniProtAccQ9XUD8
UniProt_GCRPUniProtAccQ9XUD8
SpeciesCaenorhabditis elegans
HistoryVersion_change126 May 2004 16:54:51WBPerson1971EventImportedInitial conversion from CDS class of WS125
StatusLive
Gene_infoBiotypeSO:0001217
Allele (39)
StrainWBStrain00032498
RNASeq_FPKM (74)
GO_annotation00101703
OrthologWBGene00069215Caenorhabditis remaneiFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00069216Caenorhabditis remaneiFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00028637Caenorhabditis briggsaeFrom_analysisOrthoMCL
Inparanoid_8
WormBase-Compara
WBGene00028638Caenorhabditis briggsaeFrom_analysisOrthoMCL
Inparanoid_8
WormBase-Compara
WBGene00061030Caenorhabditis remaneiFrom_analysisOMA
TreeFam
WormBase-Compara
WBGene00085374Caenorhabditis remaneiFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00080940Caenorhabditis remaneiFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00140617Caenorhabditis brenneriFrom_analysisTreeFam
WBGene00151802Caenorhabditis brenneriFrom_analysisTreeFam
WBGene00150984Caenorhabditis brenneriFrom_analysisTreeFam
WBGene00163397Caenorhabditis brenneriFrom_analysisTreeFam
WBGene00159041Caenorhabditis brenneriFrom_analysisTreeFam
WBGene00148479Caenorhabditis brenneriFrom_analysisTreeFam
WBGene00194595Caenorhabditis brenneriFrom_analysisTreeFam
WBGene00139912Caenorhabditis brenneriFrom_analysisTreeFam
WBGene00192294Caenorhabditis brenneriFrom_analysisTreeFam
WBGene00212570Caenorhabditis japonicaFrom_analysisTreeFam
WormBase-Compara
WBGene00131905Caenorhabditis japonicaFrom_analysisTreeFam
WormBase-Compara
WBGene00124456Caenorhabditis japonicaFrom_analysisTreeFam
WormBase-Compara
WBGene00056828Caenorhabditis remaneiFrom_analysisTreeFam
WormBase-Compara
WBGene00042508Caenorhabditis briggsaeFrom_analysisWormBase-Compara
CSP26.g13918Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP26.g13919Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP26.g13920Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP26.g13921Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP26.g16297Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP26.g18324Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g13791Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP28.g13792Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP28.g13793Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP28.g13795Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g6301Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g11924Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP31.g11926Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP31.g16238Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP31.g21508Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP31.g21510Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP31.g27021Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP31.g8086Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP31.g8087Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP31.g8090Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP31.g8091Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP31.g8092Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP31.g8093Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP31.g8094Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP31.g8096Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g14383Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP39.g7889Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g18342Caenorhabditis tribulationisFrom_analysisWormBase-Compara
CSP40.g19668Caenorhabditis tribulationisFrom_analysisWormBase-Compara
CSP40.g19669Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cnig_chr_IV.g14445Caenorhabditis nigoniFrom_analysisWormBase-Compara
Cnig_chr_V.g18205Caenorhabditis nigoniFrom_analysisWormBase-Compara
Cnig_chr_V.g18206Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp5_scaffold_00321.g9366Caenorhabditis sinicaFrom_analysisWormBase-Compara
Csp5_scaffold_00760.g15213Caenorhabditis sinicaFrom_analysisWormBase-Compara
Csp5_scaffold_00760.g15214Caenorhabditis sinicaFrom_analysisWormBase-Compara
Csp5_scaffold_00760.g15215Caenorhabditis sinicaFrom_analysisWormBase-Compara
Csp5_scaffold_00760.g15218Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_02606Caenorhabditis latensFrom_analysisWormBase-Compara
FL83_12651Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_015363Caenorhabditis remaneiFrom_analysisWormBase-Compara
GCK72_015366Caenorhabditis remaneiFrom_analysisWormBase-Compara
GCK72_020178Caenorhabditis remaneiFrom_analysisWormBase-Compara
GCK72_020179Caenorhabditis remaneiFrom_analysisWormBase-Compara
GCK72_020766Caenorhabditis remaneiFrom_analysisWormBase-Compara
Pan_g12996Panagrellus redivivusFrom_analysisWormBase-Compara
Pan_g23479Panagrellus redivivusFrom_analysisWormBase-Compara
chrIV_pilon.g12188Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00209779Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00291007Trichuris murisFrom_analysisWormBase-Compara
WBGene00302102Trichuris murisFrom_analysisWormBase-Compara
Paralog (36)
Structured_descriptionConcise_descriptionF55G11.2 encodes a protein containing a CUB (complement C1r/C1s, Uegf, Bmp1)-like domain; F55G11.2 expression is upregulated in response to infection with the human bacterial pathogen Pseudomonas aeruginosa; F55G11.2 expression is regulated by the ELT-2 GATA transcription factor.Paper_evidenceWBPaper00028482
Curator_confirmedWBPerson1843
Date_last_updated17 Jan 2013 00:00:00
Automated_descriptionInvolved in innate immune response.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSF55G11.2
Corresponding_transcriptF55G11.2.1
Associated_featureWBsf652318
WBsf231075
Experimental_infoRNAi_resultWBRNAi00032902Inferred_automaticallyRNAi_primary
WBRNAi00015751Inferred_automaticallyRNAi_primary
WBRNAi00048550Inferred_automaticallyRNAi_primary
Expr_patternExpr11204
Expr1026799
Expr1152335
Expr2004245
Expr2022468
Drives_constructWBCnstr00018219
WBCnstr00020808
WBCnstr00031649
Construct_productWBCnstr00031649
Microarray_results (14)
Expression_cluster (326)
Interaction (24)
Map_infoPositivePositive_cloneF55G11Inferred_automaticallyFrom sequence, transcript, pseudogene data
Interpolated_map_positionIV6.78302
ReferenceWBPaper00028482
WBPaper00028789
WBPaper00035891
WBPaper00041800
WBPaper00047109
MethodGene