WormBase Tree Display for Gene: WBGene00010062
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WBGene00010062 | SMap | S_parent | Sequence | F54F3 | |||
---|---|---|---|---|---|---|---|
Identity (6) | |||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | lipl | ||||||
Allele (32) | |||||||
RNASeq_FPKM (74) | |||||||
GO_annotation (11) | |||||||
Ortholog (73) | |||||||
Paralog | WBGene00008510 | Caenorhabditis elegans | From_analysis | TreeFam | |||
Panther | |||||||
WormBase-Compara | |||||||
WBGene00009773 | Caenorhabditis elegans | From_analysis | TreeFam | ||||
Panther | |||||||
WormBase-Compara | |||||||
WBGene00019376 | Caenorhabditis elegans | From_analysis | TreeFam | ||||
Panther | |||||||
WormBase-Compara | |||||||
WBGene00022642 | Caenorhabditis elegans | From_analysis | TreeFam | ||||
Inparanoid_8 | |||||||
Panther | |||||||
WormBase-Compara | |||||||
WBGene00020016 | Caenorhabditis elegans | From_analysis | TreeFam | ||||
Inparanoid_8 | |||||||
Panther | |||||||
WormBase-Compara | |||||||
WBGene00014770 | Caenorhabditis elegans | From_analysis | modENCODE_Pseudogenes | ||||
WBGene00021963 | Caenorhabditis elegans | From_analysis | TreeFam | ||||
Panther | |||||||
WormBase-Compara | |||||||
WBGene00013050 | Caenorhabditis elegans | From_analysis | TreeFam | ||||
Panther | |||||||
WormBase-Compara | |||||||
Structured_description | Automated_description | Predicted to enable hydrolase activity, acting on ester bonds. Involved in lipid catabolic process. Located in lysosome. Expressed in intestine. Human ortholog(s) of this gene implicated in Wolman disease; autosomal recessive congenital ichthyosis 8; and cholesterol ester storage disease. Is an ortholog of several human genes including LIPA (lipase A, lysosomal acid type); LIPF (lipase F, gastric type); and LIPJ (lipase family member J). | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Disease_info | Potential_model | DOID:0080217 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:6617) | ||
DOID:14502 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:6617) | ||||
DOID:14497 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:6617) | ||||
DOID:0060717 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:23452) | ||||
Molecular_info | Corresponding_CDS | F54F3.3 | |||||
Corresponding_transcript | F54F3.3.1 | ||||||
Other_sequence (158) | |||||||
Associated_feature (3) | |||||||
Experimental_info | RNAi_result | WBRNAi00048376 | Inferred_automatically | RNAi_primary | |||
WBRNAi00032814 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00102884 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00002279 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00015656 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00078262 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Chronogram1974 | ||||||
Expr6184 | |||||||
Expr1016806 | |||||||
Expr1152165 | |||||||
Expr2013204 | |||||||
Expr2031436 | |||||||
Drives_construct | WBCnstr00003635 | ||||||
WBCnstr00017676 | |||||||
WBCnstr00031698 | |||||||
Construct_product | WBCnstr00031698 | ||||||
Microarray_results (20) | |||||||
Expression_cluster (315) | |||||||
Interaction (36) | |||||||
Map_info | Map | V | Position | 4.73223 | Error | 0.002129 | |
Positive | Positive_clone | F54F3 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Pseudo_map_position | |||||||
Reference (13) | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |