WormBase Tree Display for Gene: WBGene00009899

WBGene00009899 SMap: S_parent: Sequence: F49E12
  Identity: Version: 3
    Name: CGC_name: efl-3 Person_evidence: WBPerson9958
            WBPerson32
      Sequence_name: F49E12.6
      Molecular_name: F49E12.6
        F49E12.6.1
        CE37018
      Other_name: CELE_F49E12.6 Accession_evidence: NDB BX284602
      Public_name: efl-3
    DB_info: Database: AceView gene 2I705
        WormQTL gene WBGene00009899
        WormFlux gene WBGene00009899
        NDB locus_tag CELE_F49E12.6
        Panther gene CAEEL|WormBase=WBGene00009899|UniProtKB=Q20619
          family PTHR12081
        NCBI gene 174341
        RefSeq protein NM_063370.8
        SwissProt UniProtAcc Q20619
        UniProt_GCRP UniProtAcc Q20619
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:50 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 15 Jul 2004 16:24:32 WBPerson1983 Event: Acquires_merge: WBGene00014383
        3 18 Jan 2011 09:45:53 WBPerson2970 Name_change: CGC_name: efl-3
      Acquires_merge: WBGene00014383
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: efl
    Allele (46)
    Strain: WBStrain00036869
      WBStrain00037043
    RNASeq_FPKM (74)
    GO_annotation (12)
    Ortholog (35)
    Paralog: WBGene00001161 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00001162 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
    Structured_description: Concise_description: efl-3 encodes a protein with two E2F domains that may be involved in apoptosis. Paper_evidence: WBPaper00004589
          Curator_confirmed: WBPerson1843
            WBPerson567
          Date_last_updated: 25 Jan 2011 00:00:00
      Automated_description: Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Involved in negative regulation of gene expression. Predicted to be located in nucleus. Predicted to be part of RNA polymerase II transcription regulator complex. Expressed in VA neuron; VB neuron; head neurons; and ventral nerve cord. Is an ortholog of human E2F8 (E2F transcription factor 8). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: F49E12.6
    Corresponding_CDS_history: F49E12.6:wp128
    Corresponding_transcript: F49E12.6.1
    Other_sequence: Tcol_isotig22761
      Dviv_isotig35076
      EX557338.1
      ACC19820_1
      JI165989.1
      JI170192.1
    Associated_feature (15)
    Transcription_factor: WBTranscriptionFactor000426
  Experimental_info: RNAi_result: WBRNAi00084316 Inferred_automatically: RNAi_primary
      WBRNAi00015321 Inferred_automatically: RNAi_primary
      WBRNAi00115678 Inferred_automatically: RNAi_primary
      WBRNAi00071180 Inferred_automatically: RNAi_primary
      WBRNAi00084319 Inferred_automatically: RNAi_primary
      WBRNAi00032541 Inferred_automatically: RNAi_primary
      WBRNAi00047854 Inferred_automatically: RNAi_primary
      WBRNAi00064102 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr9314
      Expr1019940
      Expr1034314
      Expr1151688
      Expr1200115
      Expr2011191
      Expr2029427
    Drives_construct: WBCnstr00013895
      WBCnstr00015861
      WBCnstr00031831
    Construct_product: WBCnstr00016750
      WBCnstr00031831
    Microarray_results (26)
    Expression_cluster (228)
    Interaction: WBInteraction000052020
      WBInteraction000504879
  Map_info: Map: II Position: 0.772641 Error: 0.000251
    Positive: Positive_clone: F49E12 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference (13)
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene