WormBase Tree Display for Gene: WBGene00008035
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| WBGene00008035 | SMap | S_parent | Sequence | C39E9 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | C39E9.12 | |||||||
| Molecular_name | C39E9.12 | ||||||||
| C39E9.12.1 | |||||||||
| CE39690 | |||||||||
| Other_name | CELE_C39E9.12 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | C39E9.12 | ||||||||
| DB_info | Database | AceView | gene | 4N859 | |||||
| WormQTL | gene | WBGene00008035 | |||||||
| WormFlux | gene | WBGene00008035 | |||||||
| NDB | locus_tag | CELE_C39E9.12 | |||||||
| NCBI | gene | 178258 | |||||||
| RefSeq | protein | NM_070115.10 | |||||||
| TrEMBL | UniProtAcc | Q18546 | |||||||
| UniProt_GCRP | UniProtAcc | Q18546 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:48 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (26) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Contained_in_operon | CEOP4528 | ||||||||
| Ortholog (22) | |||||||||
| Paralog | WBGene00012769 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||||
| WBGene00017620 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Structured_description | Automated_description | Enriched in several structures, including ABplapaaapa; ABplapppapp; ABprapaaapa; ciliated neurons; and germ line based on RNA-seq and single-cell RNA-seq studies. Is affected by several genes including daf-2; skn-1; and glp-1 based on microarray; tiling array; RNA-seq; and proteomic studies. Is affected by fifteen chemicals including stavudine; Zidovudine; and Psoralens based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: SAP domain and SAP domain superfamily. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C39E9.12 | |||||||
| Corresponding_CDS_history | C39E9.12:wp154 | ||||||||
| Corresponding_transcript | C39E9.12.1 | ||||||||
| Other_sequence | CJC18214_1 | ||||||||
| CR09383 | |||||||||
| CRC07866_1 | |||||||||
| CJC00842_1 | |||||||||
| CR09384 | |||||||||
| CGC00913_1 | |||||||||
| Associated_feature | WBsf646510 | ||||||||
| WBsf998328 | |||||||||
| WBsf229384 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00042217 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00007821 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00011787 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1022928 | ||||||||
| Expr1033493 | |||||||||
| Expr1146208 | |||||||||
| Expr2001540 | |||||||||
| Expr2019761 | |||||||||
| Drives_construct | WBCnstr00033288 | ||||||||
| Construct_product | WBCnstr00033288 | ||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (154) | |||||||||
| Interaction (102) | |||||||||
| Map_info | Positive | Positive_clone | C39E9 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | IV | 7.85328 | |||||||
| Method | Gene |
