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WormBase Tree Display for Gene: WBGene00008035

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Name Class

WBGene00008035SMapS_parentSequenceC39E9
IdentityVersion1
NameSequence_nameC39E9.12
Molecular_nameC39E9.12
C39E9.12.1
CE39690
Other_nameCELE_C39E9.12Accession_evidenceNDBBX284604
Public_nameC39E9.12
DB_infoDatabaseAceViewgene4N859
WormQTLgeneWBGene00008035
WormFluxgeneWBGene00008035
NDBlocus_tagCELE_C39E9.12
NCBIgene178258
RefSeqproteinNM_070115.10
TrEMBLUniProtAccQ18546
UniProt_GCRPUniProtAccQ18546
SpeciesCaenorhabditis elegans
HistoryVersion_change126 May 2004 16:54:48WBPerson1971EventImportedInitial conversion from CDS class of WS125
StatusLive
Gene_infoBiotypeSO:0001217
Allele (26)
RNASeq_FPKM (74)
Contained_in_operonCEOP4528
OrthologWBGene00025013Caenorhabditis briggsaeFrom_analysisHillier-set
OrthoMCL
OMA
Inparanoid_8
WormBase-Compara
WBGene00062726Caenorhabditis remaneiFrom_analysisOMA
Inparanoid_8
WormBase-Compara
WBGene00162041Caenorhabditis brenneriFrom_analysisInparanoid_8
WormBase-Compara
WBGene00127930Caenorhabditis japonicaFrom_analysisInparanoid_8
WormBase-Compara
WBGene00103936Pristionchus pacificusFrom_analysisInparanoid_8
WBGene00154661Caenorhabditis brenneriFrom_analysisWormBase-Compara
CBOVI.g8967Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP26.g15247Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g13815Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g6969Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g26730Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g14400Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP39.g16131Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP39.g4652Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g2356Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00598.g12637Caenorhabditis angariaFrom_analysisWormBase-Compara
Cni-C39E9.12Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold587.g4914Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_00041.g2194Caenorhabditis sinicaFrom_analysisWormBase-Compara
GCK72_014494Caenorhabditis remaneiFrom_analysisWormBase-Compara
Sp34_40145400Caenorhabditis inopinataFrom_analysisWormBase-Compara
chrIV_pilon.g12217Caenorhabditis elegansFrom_analysisWormBase-Compara
ParalogWBGene00012769Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00017620Caenorhabditis elegansFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionEnriched in several structures, including ABplapaaapa; ABplapppapp; ABprapaaapa; ciliated neurons; and germ line based on RNA-seq and single-cell RNA-seq studies. Is affected by several genes including daf-2; skn-1; and glp-1 based on microarray; tiling array; RNA-seq; and proteomic studies. Is affected by fifteen chemicals including stavudine; Zidovudine; and Psoralens based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: SAP domain and SAP domain superfamily.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSC39E9.12
Corresponding_CDS_historyC39E9.12:wp154
Corresponding_transcriptC39E9.12.1
Other_sequenceCJC18214_1
CR09383
CRC07866_1
CJC00842_1
CR09384
CGC00913_1
Associated_featureWBsf646510
WBsf998328
WBsf229384
Experimental_infoRNAi_resultWBRNAi00042217Inferred_automaticallyRNAi_primary
WBRNAi00007821Inferred_automaticallyRNAi_primary
WBRNAi00011787Inferred_automaticallyRNAi_primary
Expr_patternExpr1022928
Expr1033493
Expr1146208
Expr2001540
Expr2019761
Drives_constructWBCnstr00033288
Construct_productWBCnstr00033288
Microarray_results (19)
Expression_cluster (154)
Interaction (102)
Map_infoPositivePositive_cloneC39E9Inferred_automaticallyFrom sequence, transcript, pseudogene data
Interpolated_map_positionIV7.85328
MethodGene