WormBase Tree Display for Gene: WBGene00007955
expand all nodes | collapse all nodes | view schema
| WBGene00007955 | SMap | S_parent | Sequence | C35C5 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | selt-1.1 | Person_evidence | WBPerson5890 | |||||
| Sequence_name | C35C5.3 | ||||||||
| Molecular_name | C35C5.3a | ||||||||
| C35C5.3a.1 | |||||||||
| CE43224 | |||||||||
| C35C5.3b | |||||||||
| CE43266 | |||||||||
| C35C5.3b.1 | |||||||||
| Other_name | CELE_C35C5.3 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | selt-1.1 | ||||||||
| DB_info | Database (12) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:48 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 29 Nov 2016 11:06:21 | WBPerson2970 | Name_change | CGC_name | selt-1.1 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | selt | ||||||||
| Allele (27) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00100346 | ||||||||
| 00100347 | |||||||||
| 00100348 | |||||||||
| 00100349 | |||||||||
| 00100350 | |||||||||
| 00100351 | |||||||||
| 00100352 | |||||||||
| 00100353 | |||||||||
| 00100354 | |||||||||
| 00100355 | |||||||||
| Ortholog (36) | |||||||||
| Paralog | WBGene00009238 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WormBase-Compara | |||||||||
| Structured_description | Automated_description | Predicted to enable thioredoxin-disulfide reductase (NADP) activity. Predicted to be involved in cell redox homeostasis. Predicted to be located in endoplasmic reticulum membrane. Expressed in several structures, including P5.paaa; amphid neurons; body wall musculature; interfacial epithelial cell; and pharyngeal cell. Is an ortholog of human SELENOT (selenoprotein T). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C35C5.3a | |||||||
| C35C5.3b | |||||||||
| Corresponding_CDS_history | C35C5.3a:wp196 | ||||||||
| C35C5.3b:wp196 | |||||||||
| Corresponding_transcript | C35C5.3a.1 | ||||||||
| C35C5.3b.1 | |||||||||
| Other_sequence (43) | |||||||||
| Associated_feature | WBsf654426 | ||||||||
| WBsf982240 | |||||||||
| WBsf1007032 | |||||||||
| WBsf1023890 | |||||||||
| WBsf237974 | |||||||||
| WBsf237975 | |||||||||
| WBsf237976 | |||||||||
| WBsf237977 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00041965 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00011652 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr13334 | ||||||||
| Expr1025113 | |||||||||
| Expr1033453 | |||||||||
| Expr1145979 | |||||||||
| Expr2015739 | |||||||||
| Expr2033972 | |||||||||
| Drives_construct | WBCnstr00033353 | ||||||||
| WBCnstr00039205 | |||||||||
| WBCnstr00039206 | |||||||||
| Construct_product | WBCnstr00033353 | ||||||||
| WBCnstr00039206 | |||||||||
| Microarray_results (27) | |||||||||
| Expression_cluster (111) | |||||||||
| Interaction | WBInteraction000029886 | ||||||||
| WBInteraction000549760 | |||||||||
| WBInteraction000551567 | |||||||||
| WBInteraction000567577 | |||||||||
| WBInteraction000574249 | |||||||||
| WBInteraction000574596 | |||||||||
| WBInteraction000586040 | |||||||||
| Map_info | Map | X | Position | 4.35569 | |||||
| Positive | Positive_clone | C35C5 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00051003 | |||||||||
| WBPaper00055090 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
