WormBase Tree Display for Gene: WBGene00007955
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WBGene00007955 | SMap | S_parent | Sequence | C35C5 | ||
---|---|---|---|---|---|---|
Identity (6) | ||||||
Gene_info | Biotype | SO:0001217 | ||||
Gene_class | selt | |||||
Allele (27) | ||||||
RNASeq_FPKM (74) | ||||||
GO_annotation | 00100346 | |||||
00100347 | ||||||
00100348 | ||||||
00100349 | ||||||
00100350 | ||||||
00100351 | ||||||
00100352 | ||||||
00100353 | ||||||
00100354 | ||||||
00100355 | ||||||
Ortholog (36) | ||||||
Paralog | WBGene00009238 | Caenorhabditis elegans | From_analysis | Panther | ||
WormBase-Compara | ||||||
Structured_description | Automated_description | Predicted to enable thioredoxin-disulfide reductase (NADP) activity. Predicted to be involved in cell redox homeostasis. Predicted to be located in endoplasmic reticulum membrane. Expressed in several structures, including P5.paaa; amphid neurons; body wall musculature; interfacial epithelial cell; and pharyngeal cell. Is an ortholog of human SELENOT (selenoprotein T). | Paper_evidence | WBPaper00065943 | ||
Curator_confirmed | WBPerson324 | |||||
WBPerson37462 | ||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||
Date_last_updated | 29 Nov 2023 00:00:00 | |||||
Molecular_info | Corresponding_CDS | C35C5.3a | ||||
C35C5.3b | ||||||
Corresponding_CDS_history | C35C5.3a:wp196 | |||||
C35C5.3b:wp196 | ||||||
Corresponding_transcript | C35C5.3a.1 | |||||
C35C5.3b.1 | ||||||
Other_sequence (43) | ||||||
Associated_feature | WBsf654426 | |||||
WBsf982240 | ||||||
WBsf1007032 | ||||||
WBsf1023890 | ||||||
WBsf237974 | ||||||
WBsf237975 | ||||||
WBsf237976 | ||||||
WBsf237977 | ||||||
Experimental_info | RNAi_result | WBRNAi00041965 | Inferred_automatically | RNAi_primary | ||
WBRNAi00011652 | Inferred_automatically | RNAi_primary | ||||
Expr_pattern | Expr13334 | |||||
Expr1025113 | ||||||
Expr1033453 | ||||||
Expr1145979 | ||||||
Expr2015739 | ||||||
Expr2033972 | ||||||
Drives_construct | WBCnstr00033353 | |||||
WBCnstr00039205 | ||||||
WBCnstr00039206 | ||||||
Construct_product | WBCnstr00033353 | |||||
WBCnstr00039206 | ||||||
Microarray_results (27) | ||||||
Expression_cluster (111) | ||||||
Interaction | WBInteraction000029886 | |||||
WBInteraction000549760 | ||||||
WBInteraction000551567 | ||||||
WBInteraction000567577 | ||||||
WBInteraction000574249 | ||||||
WBInteraction000574596 | ||||||
WBInteraction000586040 | ||||||
Map_info | Map | X | Position | 4.35569 | ||
Positive | Positive_clone | C35C5 | Inferred_automatically | From sequence, transcript, pseudogene data | ||
Pseudo_map_position | ||||||
Reference | WBPaper00038491 | |||||
WBPaper00051003 | ||||||
WBPaper00055090 | ||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||
Method | Gene |