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WormBase Tree Display for Gene: WBGene00007951

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Name Class

WBGene00007951SMapS_parentSequenceC35A5
IdentityVersion2
NameCGC_namedmsr-8Person_evidenceWBPerson260
Sequence_nameC35A5.7
Molecular_nameC35A5.7
C35A5.7.1
CE52851
Other_nameCELE_C35A5.7Accession_evidenceNDBBX284605
Public_namedmsr-8
DB_infoDatabaseAceViewgene5K988
WormQTLgeneWBGene00007951
WormFluxgeneWBGene00007951
NDBlocus_tagCELE_C35A5.7
PanthergeneCAEEL|WormBase=WBGene00007951|UniProtKB=Q18475
familyPTHR46273
NCBIgene183225
RefSeqproteinNM_073296.8
TREEFAMTREEFAM_IDTF315509
TrEMBLUniProtAccQ18475
UniProt_GCRPUniProtAccQ18475
SpeciesCaenorhabditis elegans
HistoryVersion_change126 May 2004 16:54:48WBPerson1971EventImportedInitial conversion from CDS class of WS125
220 Dec 2011 16:46:04WBPerson2970Name_changeCGC_namedmsr-8
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classdmsr
Allele (48)
StrainWBStrain00050977
RNASeq_FPKM (74)
GO_annotation00061338
00061339
00061340
00061341
00115930
00115931
00115932
00115933
Ortholog (32)
Paralog (187)
Structured_descriptionAutomated_descriptionPredicted to enable G protein-coupled peptide receptor activity. Predicted to be involved in G protein-coupled receptor signaling pathway. Predicted to be located in plasma membrane.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSC35A5.7
Corresponding_CDS_historyC35A5.7:wp87
C35A5.7:wp268
Corresponding_transcriptC35A5.7.1
Other_sequence (17)
Associated_featureWBsf1001128
WBsf1001129
WBsf1001130
WBsf1020316
WBsf234403
Experimental_infoRNAi_resultWBRNAi00029563Inferred_automaticallyRNAi_primary
WBRNAi00041951Inferred_automaticallyRNAi_primary
WBRNAi00011643Inferred_automaticallyRNAi_primary
Expr_patternExpr1028114
Expr1145960
Expr2010975
Expr2029213
Drives_constructWBCnstr00033357
Construct_productWBCnstr00033357
Microarray_results (20)
Expression_clusterWBPaper00037682:sma-2_sma-4_upregulated
WBPaper00037950:A-class-motor-neurons_L2-larva_expressed
WBPaper00037950:all-neurons_L2-larva_expressed
WBPaper00037950:AVE-neuron_L1-larva_expressed
WBPaper00037950:bodywall-muscle_L2-larva_expressed
WBPaper00037950:dopaminergic-neurons_L3-L4-larva_expressed
WBPaper00037950:glr-1(+)-neurons_L2-larva_expressed
WBPaper00037950:glr-1(+)-neurons_larva_enriched
WBPaper00037950:glr-1(+)-neurons_larva_SelectivelyEnriched
WBPaper00037950:hypodermis_L3-L4-larva_expressed
WBPaper00037950:PVD-OLL-neurons_L3-L4-larva_expressed
WBPaper00038438:E.faecalis_24hr_upregulated_TilingArray
WBPaper00038438:P.lumniescens_24hr_upregulated_TilingArray
WBPaper00044736:flat_dev_expression
WBPaper00045521:Spermatogenic
WBPaper00045974:NSM_enriched_totalRNA_RNAseq
WBPaper00046509:htz-1(ok3099)_upregulated
WBPaper00048988:neuron_enriched
WBPaper00048988:neuron_expressed
WBPaper00049545:cco-1(RNAi)_upregulated
WBPaper00049545:jmjd-3.1(+)_upregulated
WBPaper00049545:rgef-1p-jmjd-1.2(+)_upregulated
WBPaper00049545:sur-5p-jmjd-1.2(+)_upregulated
WBPaper00050488:adult_vs_dauer_regulated_N2_20C
WBPaper00050488:mir-34(gk437)_vs_mir-34(OverExpression)_regulated_dauer_20C
WBPaper00050488:N2_vs_mir-34(gk437)_regulated_dauer_20C
WBPaper00050726:OsmoticStress_regulated_Food
WBPaper00050859:upregulated_P-granule(-)GFP(+)_vs_control_day2-adult
WBPaper00050859:upregulated_P-granule(-)GFP(-)_vs_control_day2-adult
WBPaper00050859:upregulated_pgl-1(ct131)_vs_control_day1-adult
WBPaper00053184:sma-4(rax3)_upregulated
WBPaper00053302:stavudine_24h_regulated
WBPaper00053664:ins-11(tm1053)_upregulated
WBPaper00055386:daf-2(e1370)_upregulated
WBPaper00055482:pmt-2(RNAi)_upregulated
WBPaper00056090:E.faecalis_upregulated_hpx-2(dg047)
WBPaper00056090:E.faecalis_upregulated_N2
WBPaper00056161:male_enriched_siRNA
WBPaper00056284:ints-1(RNAi)_downregulated
WBPaper00056293:rpl-5(0)-rpl-33(0)_upregulated
WBPaper00057288:iff-1(RNAi)_upregulated_transcript
WBPaper00058598:mex-1(or286)_upregulated
WBPaper00058598:mex-3(eu149)_upregulated
WBPaper00058598:spn-4(tm291)_upregulated
WBPaper00058948:PA14_downregulated
WBPaper00059027:neuron-synapses_depleted
WBPaper00059609:malt-1_ilc-17.1_nfki-1_upregulated
WBPaper00060014:set-2(tm1630)_downregulated
WBPaper00060273:isp-1(qm150)_upregulated
WBPaper00060459:bcat-1(RNAi)_upregulated
WBPaper00060661:sensory-neuron_enriched
WBPaper00060811:L1_vs_adult_upregulated_neural
WBPaper00061081:E.faecalis_upregulated_N2
WBPaper00061340:AIA
WBPaper00061340:AIB
WBPaper00061340:DVA
WBPaper00061340:Neuroblast_ADE_ADA
WBPaper00061340:RIB
WBPaper00061340:RIC
WBPaper00061340:SIB
WBPaper00061341:28C_24h_upregulated
WBPaper00061341:28C_48h_upregulated
WBPaper00061424:Diet_MYb120_upregulated
WBPaper00061527:ckr-1-T09B9.3
WBPaper00061651:PDB_enriched
WBPaper00061902:camt-1(ok515)_regulated_URX-AQR-PQR
WBPaper00061995:mter-4(syb3662syb3403)_downregulated
WBPaper00062103:neuron_enriched
WBPaper00062159:hda-2(ok1479)_upregulated
WBPaper00062167:mbl-1(tm1563)_downregulated
WBPaper00062325:muscle_depleted_coding-RNA
WBPaper00062446:nhr-8(hd117)_upregulated
WBPaper00064088:Day-1-adult_vs_L4_downregulated_daf-16(mu86);glp-1(e2141)
WBPaper00064088:Day-3-adult_vs_L4_downregulated_daf-16(mu86);glp-1(e2141)
WBPaper00064088:Day-3-adult_vs_L4_downregulated_fem-3(q20)
WBPaper00064088:Day-3-adult_vs_L4_downregulated_glp-1(e2141)
WBPaper00064306:Agaro-oligosaccharides_upregulated
WBPaper00064721:fasn-1(g14)_downregulated_starved
WBPaper00064933:bcf-1(ylf1)_upregulated_transcript
WBPaper00065096:25C_vs_20C_downregulated
WBPaper00065096:Day10_vs_Day1_downregulated
WBPaper00065749:Heat-Shock_downregulated_N2
WBPaper00065841:32_0
WBPaper00065841:76_0
WBPaper00065841:80_0
WBPaper00065841:97_0
WBPaper00065841:103_0
WBPaper00065841:104_0
WBPaper00065841:112_0
WBPaper00065841:120_0
WBPaper00065841:121_0
WBPaper00065841:122_0
WBPaper00065841:129_0
WBPaper00065841:132_0
WBPaper00065841:136_0
WBPaper00065975:P-body_vs_oocyte_enriched
WBPaper00065993:glp-1(e2141)_upregulated
WBPaper00066038:mip-1(how5)_upregulated
WBPaper00066110:tetraploid_vs_diploid_upregulated
WBPaper00066232:ash-2(RNAi)_downregulated_WT
WBPaper00025141:N2_Expressed_Genes
WBPaper00025141:unc-4::GFP_Expressed_Genes
WBPaper00026929:sir-2.1_overexpression_regulated
WBPaper00026980:intestine_enriched
WBPaper00030839:Larval_Pan_Neuronal
WBPaper00035588:alg-1(-)_upregulated
WBPaper00036130:mir-243_up_regulated
WBPaper00040858:eQTL_regulated_aging
WBPaper00041174:environmental
WBPaper00041174:environmental_prime
WBPaper00041939:EtBr-exposed_vs_UVC-exposed_48h
WBPaper00041939:EtBr-exposed_vs_UVC-exposed_51h
WBPaper00041939:UVC-EtBr-exposed_vs_UVC-exposed_48h
WBPaper00042548:miRISC_enriched
WBPaper00048637:lin-35(n745)_starvation_downregulated
WBPaper00056330:mrps-5(RNAi)_upregulated
InteractionWBInteraction000275657
WBInteraction000409263
Map_infoMapVPosition2.57086
PositivePositive_cloneC35A5Inferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
ReferenceWBPaper00031385
WBPaper00064746
WBPaper00065946
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene