WormBase Tree Display for Gene: WBGene00007138
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| WBGene00007138 | SMap | S_parent | Sequence | B0285 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | B0285.6 | |||||||
| Molecular_name | B0285.6 | ||||||||
| B0285.6.1 | |||||||||
| CE54152 | |||||||||
| Other_name | CELE_B0285.6 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | B0285.6 | ||||||||
| DB_info | Database | AceView | gene | 3F445 | |||||
| WormQTL | gene | WBGene00007138 | |||||||
| WormFlux | gene | WBGene00007138 | |||||||
| NDB | locus_tag | CELE_B0285.6 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00007138|UniProtKB=P46556 | |||||||
| family | PTHR10283 | ||||||||
| NCBI | gene | 175563 | |||||||
| RefSeq | protein | NM_001381838.2 | |||||||
| SwissProt | UniProtAcc | P46556 | |||||||
| UniProt_GCRP | UniProtAcc | P46556 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:47 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (82) | |||||||||
| Strain | WBStrain00036994 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00046348 | ||||||||
| 00046349 | |||||||||
| 00046350 | |||||||||
| 00046351 | |||||||||
| 00046352 | |||||||||
| 00046353 | |||||||||
| 00046354 | |||||||||
| 00115355 | |||||||||
| 00115356 | |||||||||
| 00115357 | |||||||||
| Ortholog (50) | |||||||||
| Paralog | WBGene00003517 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00003518 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00003519 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| Structured_description | Concise_description | B0285.6 encodes a predicted sodium-coupled carboxylate transporter that is one of four C. elegans proteins related to Drosophila Indy and the mammalian NaDC1 and NaDC3 transporters; B0285.6::lacZ reporter fusions are expressed in the excretory cell, from early larval stages through adulthood, with some later expression occasionally seen in two large unidentified structures on the dorsal side of the pharyngeal terminal bulb. | Curator_confirmed | WBPerson1843 | |||||
| Date_last_updated | 20 Jun 2007 00:00:00 | ||||||||
| Automated_description | Predicted to enable citrate transmembrane transporter activity and succinate transmembrane transporter activity. Predicted to be involved in citrate transport. Predicted to be located in membrane. Expressed in excretory cell. Is an ortholog of human SLC13A2 (solute carrier family 13 member 2). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | B0285.6 | |||||||
| Corresponding_CDS_history | B0285.6:wp57 | ||||||||
| B0285.6:wp275 | |||||||||
| Corresponding_transcript | B0285.6.1 | ||||||||
| Other_sequence | ACC06322_1 | ||||||||
| Acan_isotig09963 | |||||||||
| LSC01433_1 | |||||||||
| FC552023.1 | |||||||||
| CD203217.1 | |||||||||
| CR07877 | |||||||||
| CRC06200_1 | |||||||||
| Dviv_isotig24226 | |||||||||
| FC552547.1 | |||||||||
| Associated_feature | WBsf658817 | ||||||||
| WBsf658818 | |||||||||
| WBsf224718 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00005082 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00009669 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00038876 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr2124 | ||||||||
| Expr1011441 | |||||||||
| Expr1143064 | |||||||||
| Expr2000123 | |||||||||
| Expr2018339 | |||||||||
| Drives_construct | WBCnstr00009264 | ||||||||
| WBCnstr00033971 | |||||||||
| Construct_product | WBCnstr00033971 | ||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (73) | |||||||||
| Interaction | WBInteraction000243122 | ||||||||
| WBInteraction000243123 | |||||||||
| WBInteraction000356902 | |||||||||
| WBInteraction000466195 | |||||||||
| WBInteraction000466196 | |||||||||
| WBInteraction000466197 | |||||||||
| WBInteraction000469096 | |||||||||
| WBInteraction000471686 | |||||||||
| WBInteraction000473627 | |||||||||
| Map_info | Positive | Positive_clone | B0285 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | III | -3.18396 | |||||||
| Reference | WBPaper00035539 | ||||||||
| WBPaper00038491 | |||||||||
| WBPaper00055090 | |||||||||
| Method | Gene |
