WormBase Tree Display for Gene: WBGene00006943
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| WBGene00006943 | SMap | S_parent | Sequence | B0336 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | wrm-1 | Person_evidence | WBPerson18 | |||||
| Sequence_name | B0336.1 | ||||||||
| Molecular_name | B0336.1a | ||||||||
| B0336.1a.1 | |||||||||
| CE26743 | |||||||||
| B0336.1b | |||||||||
| CE50356 | |||||||||
| B0336.1b.1 | |||||||||
| Other_name | CELE_B0336.1 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | wrm-1 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:43 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | wrm | ||||||||
| Allele (65) | |||||||||
| Legacy_information | [Rocheleau CE] wrm for Worm aRm Motif. No mutants known. wrm-1(RNAi) embryos lack endoderm, overproduce pharyngeal tissue, E divides prematurely, adopting MS-like fate. Predicted gene B0336.1 | ||||||||
| Strain | WBStrain00035840 | ||||||||
| WBStrain00040425 | |||||||||
| WBStrain00040426 | |||||||||
| WBStrain00008479 | |||||||||
| WBStrain00051012 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (73) | |||||||||
| Ortholog (25) | |||||||||
| Paralog | WBGene00000238 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| WBGene00001979 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Structured_description | Concise_description | wrm-1 encodes one of four C. elegans beta-catenin-like proteins; during development, wrm-1 functions in noncanonical Wnt signaling pathways that specify cell fates in the early embryo, the somatic gonad, and postembryonic hypodermal lineages. | Paper_evidence | WBPaper00002871 | |||||
| WBPaper00003570 | |||||||||
| WBPaper00003656 | |||||||||
| WBPaper00004885 | |||||||||
| WBPaper00005116 | |||||||||
| WBPaper00026736 | |||||||||
| WBPaper00026737 | |||||||||
| WBPaper00028371 | |||||||||
| Curator_confirmed | WBPerson1843 | ||||||||
| Date_last_updated | 29 Aug 2017 00:00:00 | ||||||||
| Automated_description | Enables several functions, including nuclear receptor binding activity; protein serine/threonine kinase activator activity; and transcription coactivator activity. Contributes to protein kinase activity. Involved in several processes, including axis specification; regulation of cell division; and regulation of developmental process. Located in cell cortex and nucleus. Part of serine/threonine protein kinase complex. Expressed in several structures, including E; Psub2; gonadal primordium; linker cell; and seam cell. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | B0336.1a | |||||||
| B0336.1b | |||||||||
| Corresponding_transcript | B0336.1a.1 | ||||||||
| B0336.1b.1 | |||||||||
| Other_sequence | MC05636 | ||||||||
| CRC06439_1 | |||||||||
| CR08375 | |||||||||
| CBC11084_1 | |||||||||
| MC05643 | |||||||||
| Associated_feature | WBsf654963 | ||||||||
| WBsf658985 | |||||||||
| WBsf992502 | |||||||||
| WBsf992503 | |||||||||
| WBsf992504 | |||||||||
| WBsf992505 | |||||||||
| WBsf992506 | |||||||||
| WBsf1014942 | |||||||||
| WBsf1014943 | |||||||||
| WBsf224990 | |||||||||
| Transcription_factor | WBTranscriptionFactor000876 | ||||||||
| Experimental_info | RNAi_result (129) | ||||||||
| Expr_pattern | Expr3682 | ||||||||
| Expr3683 | |||||||||
| Expr12123 | |||||||||
| Expr12449 | |||||||||
| Expr12880 | |||||||||
| Expr1018174 | |||||||||
| Expr1032957 | |||||||||
| Expr1143119 | |||||||||
| Expr2018073 | |||||||||
| Expr2036211 | |||||||||
| Drives_construct | WBCnstr00001250 | ||||||||
| WBCnstr00001424 | |||||||||
| WBCnstr00011596 | |||||||||
| WBCnstr00034083 | |||||||||
| Construct_product (12) | |||||||||
| Antibody | WBAntibody00001567 | ||||||||
| WBAntibody00001568 | |||||||||
| Microarray_results (20) | |||||||||
| Expression_cluster (141) | |||||||||
| Interaction (133) | |||||||||
| WBProcess | WBbiopr:00000073 | ||||||||
| Map_info | Map | III | Position | -1.44698 | Error | 0.000127 | |||
| Positive | Positive_clone | B0336 | Person_evidence | WBPerson524 | |||||
| Inferred_automatically | From sequence, transcript, pseudogene data | ||||||||
| Mapping_data | Multi_point | 4788 | |||||||
| Pseudo_map_position | |||||||||
| Reference (142) | |||||||||
| Picture | WBPicture0000013084 | ||||||||
| Remark | Data extracted from Rocheleau et al. (1997). Disagreement with Genefinder prediction (08/97) | ||||||||
| Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
| Method | Gene |
