WormBase Tree Display for Gene: WBGene00006911

WBGene00006911 SMap: S_parent: Sequence: R10E11
  Identity: Version: 1
    Name: CGC_name: vha-2
      Sequence_name: R10E11.2
      Molecular_name: R10E11.2
        R10E11.2.1
        CE06290
      Other_name: CELE_R10E11.2 Accession_evidence: NDB BX284603
      Public_name: vha-2
    DB_info: Database (11)
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:43 WBPerson1971 Event: Imported: Initial conversion from geneace
    Status: Live
  Gene_info (11)
  Disease_info: Potential_model: DOID:3963 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:855)
      DOID:0070472 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:855)
  Molecular_info: Corresponding_CDS: R10E11.2
    Corresponding_transcript: R10E11.2.1
    Other_sequence (91)
    Associated_feature: WBsf645516
      WBsf658533
      WBsf659450
      WBsf659451
      WBsf225622
      WBsf225623
      WBsf225624
      WBsf225625
  Experimental_info: RNAi_result (29)
    Expr_pattern: Expr1398
      Expr1461
      Expr1015085
      Expr1032928
      Expr1155367
      Expr2017988
      Expr2036124
    Drives_construct: WBCnstr00010290
      WBCnstr00034103
    Construct_product: WBCnstr00010290
      WBCnstr00034103
    Microarray_results (20)
    Expression_cluster: WBPaper00005700:transmembrane_protein
      WBPaper00032528:L3_enriched
      WBPaper00037950:AVE-neuron_L1-larva_expressed
      WBPaper00037950:PVD-OLL-neurons_L3-L4-larva_expressed
      WBPaper00038118:aak-2(gt33)_upregulated
      WBPaper00038118:stress_upregulated_N2
      WBPaper00038289:oocyte_protein
      WBPaper00038438:Harposporium_24hr_upregulated_RNAseq
      WBPaper00040221:DAF-12_target_ALF4
      WBPaper00043951:insoluble_protein_day16_N2
      WBPaper00044426:rotenone_24h_upregulated
      WBPaper00044501:gld-1_let-7_regulated
      WBPaper00044616:alg-3-4_upregulated_protein
      WBPaper00044736:flat_dev_expression
      WBPaper00045521:Gender_Neutral
      WBPaper00045974:NSM_enriched_DSN-treated_RNAseq
      WBPaper00045974:NSM_enriched_totalRNA_RNAseq
      WBPaper00046497:B.thuringiensis_0.1mix_downregulated_6h
      WBPaper00046497:B.thuringiensis_0.1mix_downregulated_12h
      WBPaper00046497:B.thuringiensis_0.5mix_downregulated_6h
      WBPaper00046497:B.thuringiensis_0.5mix_downregulated_12h
      WBPaper00048923:Aging_regulated
      WBPaper00048988:neuron_expressed
      WBPaper00049545:sur-5p-jmjd-1.2(+)_downregulated
      WBPaper00049942:HeatShock_downregulated_hsf-1(RNAi)
      WBPaper00049942:hsf-1(RNAi)_downregulated
      WBPaper00050488:adult_vs_dauer_regulated_N2_20C
      WBPaper00050488:mir-34(gk437)_vs_mir-34(OverExpression)_regulated_dauer_20C
      WBPaper00050990:arcade_intestinal-valve_expressed
      WBPaper00050990:body-muscle_expressed
      WBPaper00050990:GABAergic-neuron_expressed
      WBPaper00050990:hypodermis_expressed
      WBPaper00050990:intestine_expressed
      WBPaper00050990:NMDA-neuron_expressed
      WBPaper00050990:pharynx_expressed
      WBPaper00050990:seam_expressed
      WBPaper00051245:epidermis_cytoplasm_expressed
      WBPaper00051245:intestine_cytoplasm_expressed
      WBPaper00051352:Long-Term-Association-Memory_downregulated
      WBPaper00053184:sma-2(rax5)_upregulated
      WBPaper00053295:lin-22(ot269)_downregulated
      WBPaper00053388:dauer_regulated_Cluster6
      WBPaper00053599:oocyte_vs_mitosis_downregulated
      WBPaper00053814:25C_downregulated_OP50
      WBPaper00055971:nhl-2(ok818)_20C_downregulated
      WBPaper00056161:male_enriched_siRNA
      WBPaper00056284:ints-6(t1903)_downregulated
      WBPaper00056284:ints-9(RNAi)_downregulated
      WBPaper00056471:aak-1(tm1944);aak-2(ok524)_upregulated
      WBPaper00056471:S.aureus-4h_downregulated_N2
      WBPaper00056617:adr-1(gv6)_downregulated_embryo_protein
      WBPaper00056809:smn-1(ok355)_downregulated
      WBPaper00059174:MEG-3_interacting
      WBPaper00059605:MUT-16_interacting
      WBPaper00059763:neuron_expressed
      WBPaper00059895:wounding_downregulated
      WBPaper00060014:set-2(tm1630)_downregulated
      WBPaper00060358:B.thuringiensis_pathogen_regulated_N2
      WBPaper00060661:sensory-neuron_enriched
      WBPaper00060683:hlh-11(overexpression)_downregulated
      WBPaper00060909:atfs-1(cmh15)_downregulated
      WBPaper00061340:AMsh
      WBPaper00061340:Coelomocyte
      WBPaper00061340:Excretory_cell
      WBPaper00061341:28C_48h_downregulated
      WBPaper00061377:MYRF-1_interacting
      WBPaper00061377:PAN-1_interacting
      WBPaper00061439:unc-30(ok613)_upregulated
      WBPaper00061527:F45H10.2-R53.4_21676
      WBPaper00061527:nhr-46_2300-unc-108_2961
      WBPaper00061527:pptr-1-F08D12.1
      WBPaper00061527:tars-1-AFFX-r2-3026-5_at
      WBPaper00061651:AIZ_enriched
      WBPaper00061651:HSN_enriched
      WBPaper00061651:RID_enriched
      WBPaper00061651:SIA_enriched
      WBPaper00061651:VC_4_5_enriched
      WBPaper00061651:VC_enriched
      WBPaper00061902:camt-1(ok515)_regulated_RMG
      WBPaper00062159:hda-2(ok1479)_upregulated
      WBPaper00062193:hsf-1(RNAi)_upregulated
      WBPaper00062193:skn-1(RNAi)_upregulated
      WBPaper00062325:muscle_depleted_coding-RNA
      WBPaper00062354:H.zoospora_6h_regulated
      WBPaper00064055:trl-1(cas1077)_downregulated_non-starved
      WBPaper00064055:trl-1(cas1077)_downregulated_starved
      WBPaper00064088:Day-1-adult_vs_L4_upregulated_daf-16(mu86);glp-1(e2141)
      WBPaper00064088:Day-3-adult_vs_L4_upregulated_fem-3(q20)
      WBPaper00064716:paraquat_downregulated
      WBPaper00065032:PAO1_vs_Delt.Pf4-infection_downregulated
      WBPaper00065086:JU1400_N.ferruginous_regulated
      WBPaper00065120:body-muscle-transcriptome
      WBPaper00065158:AFD_depleted
      cgc4386_cluster_2_3
      WBPaper00025032:cluster_78
      WBPaper00025141:N2_Expressed_Genes
      WBPaper00026929:sir-2.1_overexpression_regulated
      WBPaper00026980:intestine_enriched
      WBPaper00030985:Enterococcus_faecalis_upregulated
      WBPaper00031003:0hr_muscle_depleted
      WBPaper00031003:24hr_muscle_depleted
      WBPaper00031003:total_muscle_depleted
      WBPaper00036286:Pattern_I
      WBPaper00037901:GLD-1_mRNA_targets
      WBPaper00040603:tdp-1(lf)_down_vs_N2_FC_1.2
      WBPaper00041606:CE_B.thuringiensis-DB27_regulated
      WBPaper00041606:CE_S.marcescens_regulated
      WBPaper00041606:CE_X.nematophila_regulated
      WBPaper00048624:hlh-25(ok1710)_upregulated
      WBPaper00048989:eat-2(ad465)_rapamycin_upregulated
      [cgc5767]:expression_class_E
      [cgc5767]:expression_class_ET
      [cgc5767]:expression_class_E_pi(23_min)
      [cgc5767]:expression_class_M
      [cgc5767]:expression_class_ME
      [cgc5767]:expression_class_MET
    Interaction (65)
    WBProcess: WBbiopr:00000003
  Map_info: Map: III Position: 1.06192 Error: 0.006664
    Positive: Positive_clone: R10E11 Person_evidence: WBPerson5079
            WBPerson5074
          Author_evidence: Yamamoto R
          Inferred_automatically: From sequence, transcript, pseudogene data
    Mapping_data: Multi_point: 5015
        4231
    Pseudo_map_position
  Reference (19)
  Remark: Data extracted from Oka et al. (1997)
    Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene