WormBase Tree Display for Gene: WBGene00006833

WBGene00006833 SMap: S_parent: Sequence: F53F10
  Identity: Version: 2
    Name: CGC_name: unc-108 Person_evidence: WBPerson261
      Sequence_name: F53F10.4
      Molecular_name (12)
      Other_name: rab-2
        unc-67 Person_evidence: WBPerson261
        CELE_F53F10.4 Accession_evidence: NDB BX284601
      Public_name: unc-108
    DB_info: Database: AceView gene 1E393
        WormQTL gene WBGene00006833
        WormFlux gene WBGene00006833
        NDB locus_tag CELE_F53F10.4
        Panther gene CAEEL|WormBase=WBGene00006833|UniProtKB=A0A2C9C2Y0
          family PTHR47979
        NCBI gene 171956
        RefSeq protein NM_001356805.3
            NM_001393282.1
            NM_001356804.3
            NM_001356806.3
        TrEMBL UniProtAcc A0A2C9C2Y0
            A0A2C9C3C9
            O01577
            A0A2C9C379
        UniProt_GCRP UniProtAcc A0A2C9C2Y0
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:43 WBPerson1971 Event: Imported: Initial conversion from geneace
        2 18 Nov 2008 14:39:11 WBPerson2970 Event: Acquires_merge: WBGene00006800
              Name_change: Other_name: unc-67
      Acquires_merge: WBGene00006800
    Status: Live
  Gene_info (12)
  Molecular_info: Corresponding_CDS: F53F10.4a
      F53F10.4b
      F53F10.4c
      F53F10.4d
    Corresponding_transcript: F53F10.4a.1
      F53F10.4b.1
      F53F10.4c.1
      F53F10.4d.1
    Other_sequence (24)
    Associated_feature (11)
  Experimental_info: RNAi_result (40)
    Expr_pattern (16)
    Drives_construct: WBCnstr00002664
      WBCnstr00005792
      WBCnstr00005793
      WBCnstr00013020
      WBCnstr00013022
      WBCnstr00013277
      WBCnstr00013541
      WBCnstr00019190
      WBCnstr00034128
    Construct_product (21)
    Antibody: WBAntibody00001993
      WBAntibody00001994
    Microarray_results (28)
    Expression_cluster: WBPaper00032528:L3_enriched
      WBPaper00037950:A-class-motor-neurons_L2-larva_expressed
      WBPaper00037950:all-neurons_L2-larva_expressed
      WBPaper00037950:BAG-neuron_blastula-embryo_expressed
      WBPaper00037950:CEP-sheath-cells_Day1-adult_expressed
      WBPaper00037950:coelomocytes_L2-larva_expressed
      WBPaper00037950:dopaminergic-neurons_L3-L4-larva_expressed
      WBPaper00037950:excretory-cell_L2-larva_expressed
      WBPaper00037950:GABAergic-motor-neurons_L2-larva_expressed
      WBPaper00037950:germline-precursors_blastula-embryo_expressed
      WBPaper00037950:glr-1(+)-neurons_L2-larva_expressed
      WBPaper00038289:oocyte_protein
      WBPaper00040221:DAF-12_target_ALF4
      WBPaper00040965:lipid-droplet_associated_protein
      WBPaper00044426:rotenone_24h_upregulated
      WBPaper00044501:gld-1_let-7_regulated
      WBPaper00044736:flat_dev_expression
      WBPaper00045314:S.aureus-induced_N2
      WBPaper00045420:fertilization_downregulated_transcript
      WBPaper00045521:Gender_Neutral
      WBPaper00045974:NSM_enriched_DSN-treated_RNAseq
      WBPaper00045974:NSM_enriched_totalRNA_RNAseq
      WBPaper00046161:Q40-aggregate-protein_Day7_Sarcosyl-soluble
      WBPaper00048923:Aging_regulated
      WBPaper00048988:neuron_expressed
      WBPaper00049545:jmjd-3.1(+)_downregulated
      WBPaper00049545:sur-5p-jmjd-1.2(+)_downregulated
      WBPaper00050344:AFD-neuron_enriched
      WBPaper00050344:ASER-neuron_enriched
      WBPaper00050448:KGB-1-induced
      WBPaper00050488:adult_vs_dauer_regulated_N2_20C
      WBPaper00050990:arcade_intestinal-valve_expressed
      WBPaper00050990:body-muscle_expressed
      WBPaper00050990:GABAergic-neuron_expressed
      WBPaper00050990:hypodermis_expressed
      WBPaper00050990:intestine_expressed
      WBPaper00050990:NMDA-neuron_expressed
      WBPaper00050990:pharynx_expressed
      WBPaper00050990:seam_expressed
      WBPaper00051039:germline_enriched
      WBPaper00051245:body-wall-muscle_cytoplasm_expressed
      WBPaper00051245:epidermis_cytoplasm_expressed
      WBPaper00051245:epidermis_nucleus_expressed
      WBPaper00051245:intestine_cytoplasm_expressed
      WBPaper00051245:intestine_nucleus_expressed
      WBPaper00051245:pharyngeal-muscle_cytoplasm_expressed
      WBPaper00051558:fog-2(q71)_regulated
      WBPaper00052884:emb-4(hc60)_upregulated
      WBPaper00053184:sma-2(rax5)_upregulated
      WBPaper00053184:sma-4(rax3)_upregulated
      WBPaper00053295:lin-22(ot267)_downregulated
      WBPaper00053295:lin-22(ot269)_downregulated
      WBPaper00053388:dauer_regulated_Cluster4
      WBPaper00053814:25C_downregulated_PY79
      WBPaper00055049:S.gordonii_upregulated
      WBPaper00055482:pmt-2(RNAi)_upregulated
      WBPaper00055565:AVK_enriched
      WBPaper00056139:soil-microbiota_upregulated
      WBPaper00057288:Cold_downregulated_transcript
      WBPaper00057288:iff-1(RNAi)_downregulated_transcript
      WBPaper00058969:RIS_enriched
      WBPaper00059027:neuron-synapses_depleted
      WBPaper00059174:MEG-3_interacting
      WBPaper00059356:BAZ-2_SET-6_interacting
      WBPaper00059471:EGL-43_interacting
      WBPaper00059763:neuron_expressed
      WBPaper00060014:set-2(zr2012)_downregulated
      WBPaper00060661:sensory-neuron_enriched
      WBPaper00060811:L1_vs_adult_upregulated_neural
      WBPaper00061340:AIM
      WBPaper00061340:AIY
      WBPaper00061340:ALA
      WBPaper00061340:AVH
      WBPaper00061340:AVL
      WBPaper00061340:PVT
      WBPaper00061478:SUMO-conjugated_protein
      WBPaper00061527:cdc-42_17192-rab-5_18073
      WBPaper00061527:nhr-46_2300-unc-108_2961
      WBPaper00061651:ADA_enriched
      WBPaper00061651:ADE_enriched
      WBPaper00061651:AIZ_enriched
      WBPaper00061651:AVF_enriched
      WBPaper00061651:HSN_enriched
      WBPaper00061651:NSM_enriched
      WBPaper00061651:PDE_enriched
      WBPaper00061651:PVM_enriched
      WBPaper00061651:PVR_enriched
      WBPaper00061651:PVW_enriched
      WBPaper00061651:RIG_enriched
      WBPaper00061651:RIH_enriched
      WBPaper00061651:RIP_enriched
      WBPaper00061651:RIV_enriched
      WBPaper00061651:VB01_enriched
      WBPaper00061651:VB02_enriched
      WBPaper00061651:VB_enriched
      WBPaper00062554:MAGU-2_interacting
      WBPaper00062669:extracellular-vesicle_protein
      WBPaper00064071:NHR-49_interacting
      WBPaper00064871:hypoxia_downregulated_F1
      WBPaper00065120:body-muscle-transcriptome
      WBPaper00065158:AFD_depleted
      WBPaper00065373:sek-1(km4)_downregulated_Ref
      cgc4386_cluster_4_4
      cgc4489_group_16
      WBPaper00025032:cluster_43
      WBPaper00025032:cluster_62
      WBPaper00025141:N2_Expressed_Genes
      WBPaper00025141:unc-4::GFP_Expressed_Genes
      WBPaper00026929:sir-2.1_overexpression_regulated
      WBPaper00030839:Embryo_Pan_Neuronal
      WBPaper00030839:Larval_Pan_Neuronal
      WBPaper00031003:0hr_muscle_depleted
      WBPaper00031003:total_muscle_depleted
      WBPaper00031252:AIN-1_IP_enriched
      WBPaper00031532:Larva_Pan_Neuronal_Enriched
      WBPaper00031832:slr-2_regulated
      WBPaper00032948:StarveUp2
      WBPaper00034739:N2moreDR1350
      WBPaper00034757:up_by_oxidative_stress
      WBPaper00035084:L1_enriched_AIN-2_IP
      WBPaper00035227:heat_shock_regulated
      WBPaper00035588:alg-1(-)_upregulated
      WBPaper00035905:FBF-1_Associated
      WBPaper00036123:Fluoranthene_regulated
      WBPaper00037901:GLD-1_mRNA_targets
      WBPaper00040210:Chlorpyrifos_Diazinon_24C_regulated
      WBPaper00040603:tdp-1(lf)_down_vs_N2_FC_1.2
      WBPaper00040603:tdp-1(lf)_down_vs_N2_FC_1.5
      WBPaper00041606:CE_B.thuringiensis-DB27_regulated
      WBPaper00041606:CE_X.nematophila_regulated
      WBPaper00041939:control_vs_EtBr-exposed_48h
      WBPaper00041939:control_vs_UVC-EtBr-exposed_48h
      WBPaper00041939:EtBr-exposed_vs_UVC-exposed_48h
      WBPaper00041939:UVC-EtBr-exposed_vs_UVC-exposed_48h
      WBPaper00042331:a-SWCNTs_downregulated
      WBPaper00048989:N2_allantoin_downregulated
      WBPaper00053236:Starvation_regulated_GR1307
      WBPaper00053236:Starvation_regulated_N2
      WBPaper00057098:SiO2-nanoparticles_upregulated
      [cgc5767]:expression_class_E
      [cgc5767]:expression_class_E_pi(143_min)
      [cgc5767]:expression_class_M
      [cgc5767]:expression_class_ME
    Interaction (51)
    WBProcess: WBbiopr:00000013
      WBbiopr:00000015
  Map_info: Map: I Position: -2.00793 Error: 0.05662
    Positive: Positive_clone: F53F10 Inferred_automatically: From sequence, transcript, pseudogene data
            From CDS info
    Mapping_data: 2_point: 59
        80
        489
        490
      Multi_point: 1290
        1291
        4973
        5623
        380
        381
        1288
      Pos_neg_data: 363
  Reference (55)
  Method: Gene