WormBase Tree Display for Gene: WBGene00006827
expand all nodes | collapse all nodes | view schema
WBGene00006827 | SMap | S_parent | Sequence | F08C6 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | CGC_name | unc-98 | Person_evidence | WBPerson261 | |||||
Sequence_name | F08C6.7 | ||||||||
Molecular_name | F08C6.7 | ||||||||
F08C6.7.1 | |||||||||
CE31900 | |||||||||
Other_name | CELE_F08C6.7 | Accession_evidence | NDB | BX284606 | |||||
Public_name | unc-98 | ||||||||
DB_info | Database | AceView | gene | XI190 | |||||
WormQTL | gene | WBGene00006827 | |||||||
WormFlux | gene | WBGene00006827 | |||||||
NDB | locus_tag | CELE_F08C6.7 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00006827|UniProtKB=Q19203 | |||||||
family | PTHR24409 | ||||||||
NCBI | gene | 181020 | |||||||
RefSeq | protein | NM_076883.8 | |||||||
SwissProt | UniProtAcc | Q19203 | |||||||
TREEFAM | TREEFAM_ID | TF318243 | |||||||
UniProt_GCRP | UniProtAcc | Q19203 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 07 Apr 2004 11:29:43 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
2 | 02 Mar 2018 10:40:21 | WBPerson4025 | Event | Split_into | WBGene00303053 | ||||
Split_into | WBGene00303053 | ||||||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | unc | ||||||||
Reference_allele | WBVar00248848 | ||||||||
Allele (65) | |||||||||
Legacy_information | su130 : slow somewhat Egl; abnormal muscle birefringence and ultrastructure collections of thin filaments poorly organized A and I bands. ES2 ME1. NA1. | ||||||||
[C.elegansII] su130 : slow somewhat Egl; abnormal muscle birefringence and ultrastructure, collections of thin filaments, poorly organized A and I bands; variable defects in neuroanatomy. ES2 ME1. NA1. [Zengel and Epstein 1980; Siddiqui and Culotti 1991;HE; SQ] | |||||||||
Strain | WBStrain00035294 | ||||||||
WBStrain00035295 | |||||||||
WBStrain00035296 | |||||||||
WBStrain00007704 | |||||||||
WBStrain00008391 | |||||||||
WBStrain00029994 | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation (29) | |||||||||
Ortholog (28) | |||||||||
Paralog | WBGene00005008 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||||
WBGene00011924 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
WBGene00011925 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
Structured_description | Concise_description | unc-98 encodes a protein with four C2H2 zinc fingers and several possible nuclear localization and export sequences; UNC-98 is required for normal mobility, M-line, and dense body (Z-disk analog) structures; UNC-98 binds the C-terminal portion of myosin heavy chain, as well as a number of proteins that localize to the base of dense bodies and M lines, including UNC-97/PINCH, suggesting that in vivo UNC-98 functions to link myosin thick filaments to an integrin-associated protein complex at the muscle cell membrane; UNC-98 also interacts with UNC-96, UNC-15/paramyosin, the unconventional myosin HUM-6 and the zinc-finger protein MEP-1; UNC-98 localizes to M-lines, muscle cell nuclei, and perhaps also to dense bodies. | Paper_evidence | WBPaper00000488 | |||||
WBPaper00005938 | |||||||||
WBPaper00027703 | |||||||||
WBPaper00028888 | |||||||||
WBPaper00031500 | |||||||||
Curator_confirmed | WBPerson1843 | ||||||||
WBPerson567 | |||||||||
Date_last_updated | 28 Mar 2008 00:00:00 | ||||||||
Automated_description | Enables cytoskeletal protein binding activity. Involved in several processes, including locomotory behavior; myofibril assembly; and post-embryonic body morphogenesis. Located in M band and nucleus. Expressed in anal depressor muscle; body wall musculature; head muscle; and vulval muscle. | Paper_evidence | WBPaper00065943 | ||||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | F08C6.7 | |||||||
Corresponding_CDS_history | F08C6.7:wp86 | ||||||||
F08C6.7a:wp264 | |||||||||
F08C6.7b:wp264 | |||||||||
Corresponding_transcript | F08C6.7.1 | ||||||||
Other_sequence (47) | |||||||||
Associated_feature | WBsf654148 | ||||||||
WBsf978790 | |||||||||
WBsf1023267 | |||||||||
WBsf237597 | |||||||||
WBsf237598 | |||||||||
Transcription_factor | WBTranscriptionFactor000514 | ||||||||
Experimental_info | RNAi_result (15) | ||||||||
Expr_pattern (13) | |||||||||
Drives_construct | WBCnstr00001104 | ||||||||
WBCnstr00001105 | |||||||||
WBCnstr00001106 | |||||||||
WBCnstr00006704 | |||||||||
WBCnstr00010860 | |||||||||
WBCnstr00012642 | |||||||||
WBCnstr00034132 | |||||||||
Construct_product | WBCnstr00006704 | ||||||||
WBCnstr00010860 | |||||||||
WBCnstr00015365 | |||||||||
WBCnstr00021932 | |||||||||
WBCnstr00034132 | |||||||||
Antibody | WBAntibody00000647 | ||||||||
WBAntibody00001195 | |||||||||
Microarray_results (18) | |||||||||
Expression_cluster (123) | |||||||||
Interaction (93) | |||||||||
WBProcess | WBbiopr:00000006 | ||||||||
Map_info | Map | X | Position | -1.49623 | Error | 0.009635 | |||
Positive | Positive_clone | F08C6 | Inferred_automatically | From CDS info | |||||
From sequence, transcript, pseudogene data | |||||||||
Mapping_data | 2_point | 398 | |||||||
399 | |||||||||
Multi_point | 5567 | ||||||||
Pos_neg_data | 1834 | ||||||||
1836 | |||||||||
Reference (36) | |||||||||
Remark | Sequence connection based on AF515600 [020925 ck1] | ||||||||
Method | Gene |