WormBase Tree Display for Gene: WBGene00006077

WBGene00006077 SMap: S_parent: Sequence: F57A10
  Identity: Version: 1
    Name: CGC_name: str-9 Person_evidence: WBPerson42
      Sequence_name: F57A10.1
      Molecular_name: F57A10.1
        F57A10.1.1
        CE16147
      Other_name: CELE_F57A10.1 Accession_evidence: NDB BX284605
      Public_name: str-9
    DB_info: Database: AceView gene 5Q237
        WormQTL gene WBGene00006077
        WormFlux gene WBGene00006077
        NDB locus_tag CELE_F57A10.1
        Panther gene CAEEL|WormBase=WBGene00006077|UniProtKB=O17896
          family PTHR46000
        NCBI gene 186433
        RefSeq protein NM_074525.3
        TrEMBL UniProtAcc O17896
        UniProt_GCRP UniProtAcc O17896
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:39 WBPerson1971 Event: Imported: Initial conversion from geneace
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: str
    Allele (98)
    RNASeq_FPKM (74)
    GO_annotation: 00030930
    Ortholog (28)
    Paralog (268)
    Structured_description: Automated_description: Predicted to be located in membrane. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: F57A10.1
    Corresponding_transcript: F57A10.1.1
    Associated_feature: WBsf1002344
      WBsf1002345
  Experimental_info: RNAi_result: WBRNAi00032993 Inferred_automatically: RNAi_primary
      WBRNAi00048795 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1027406
      Expr1152547
      Expr2017095
      Expr2035231
    Drives_construct: WBCnstr00034553
    Construct_product: WBCnstr00034553
    Microarray_results (20)
    Expression_cluster: WBPaper00037950:A-class-motor-neurons_L1-larva_expressed
      WBPaper00037950:A-class-motor-neurons_L2-larva_expressed
      WBPaper00037950:all-neurons_L1-larva_expressed
      WBPaper00037950:AVA-neuron_L1-larva_expressed
      WBPaper00037950:AVE-neuron_L1-larva_expressed
      WBPaper00037950:bodywall-muscle_L1-larva_expressed
      WBPaper00037950:coelomocytes_L1-larva_expressed
      WBPaper00037950:coelomocytes_L2-larva_expressed
      WBPaper00037950:dopaminergic-neurons_L1-larva_expressed
      WBPaper00037950:GABAergic-motor-neurons_L2-larva_expressed
      WBPaper00037950:germline-precursors_blastula-embryo_expressed
      WBPaper00037950:glr-1(+)-neurons_L2-larva_expressed
      WBPaper00037950:hypodermis_L1-larva_expressed
      WBPaper00037950:intestine_L1-larva_expressed
      WBPaper00037950:intestine_L2-larva_expressed
      WBPaper00037950:pharyngeal-muscle_L1-larva_expressed
      WBPaper00038438:S.marcescens_24hr_upregulated_TilingArray
      WBPaper00042477:rsr-2(RNAi)_downregulated_TilingArray
      WBPaper00044316:CH3HgCl_2.0uM_downregulated
      WBPaper00044316:CH3HgCl_7.5uM_downregulated
      WBPaper00044578:reduced-humidity_downregulated_microarray
      WBPaper00045390:tunicamycin_downregulated
      WBPaper00045774:clk-1_upregulated
      WBPaper00049484:elt-2(RNAi)_downregulated_L1
      WBPaper00049545:jmjd-3.1(+)_downregulated
      WBPaper00049545:sur-5p-jmjd-1.2(+)_downregulated
      WBPaper00050488:adult_vs_dauer_regulated_N2_20C
      WBPaper00050726:OsmoticStress_regulated_Food
      WBPaper00053888:drh-3(rrr2)_downregulated
      WBPaper00055226:adr-1(tm668)_downregulated
      WBPaper00058598:mex-3(eu149)_upregulated
      WBPaper00061527:sre-33-ZK1025.1_8337
      WBPaper00062103:neuron_enriched
      WBPaper00062590:Aging_downregulated_body-wall-muscle
      WBPaper00065926:pgph-2(overepxreesion)_upregulated_glucose
      cgc4489_group_9
      WBPaper00025141:N2_Expressed_Genes
      WBPaper00026929:sir-2.1_overexpression_regulated
      WBPaper00026980:intestine_enriched
      WBPaper00027111:rde-3(r459)_downregulated
      WBPaper00036123:Fluoranthene_regulated
      WBPaper00040858:eQTL_regulated_old
      WBPaper00041939:UVC-EtBr-exposed_vs_UVC-exposed_48h
      WBPaper00046548:dafachronic-acid_downregulated
      WBPaper00046853:AOBr_M.aeruginosa-batch-culture_downregulated
      WBPaper00048989:N2_allantoin_upregulated
      [cgc6390]:Cluster_F
    Interaction: WBInteraction000459994
  Map_info: Map: V Position: 8.7327 Error: 0.002652
    Positive: Positive_clone: F57A10 Inferred_automatically: From CDS info
            From sequence, transcript, pseudogene data
    Pseudo_map_position
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene