WormBase Tree Display for Gene: WBGene00006061

WBGene00006061 SMap: S_parent: Sequence: F30A10
  Identity: Version: 1
    Name: CGC_name: stl-1 Person_evidence: WBPerson247
      Sequence_name: F30A10.5
      Molecular_name: F30A10.5a
        F30A10.5a.1
        CE47010
        F30A10.5b
        F30A10.5b.1
      Other_name: CELE_F30A10.5 Accession_evidence: NDB BX284601
      Public_name: stl-1
    DB_info: Database: AceView gene 1K62
        WormQTL gene WBGene00006061
        WormFlux gene WBGene00006061
        NDB locus_tag CELE_F30A10.5
        Panther gene CAEEL|WormBase=WBGene00006061|UniProtKB=H2FLJ1
          family PTHR43327
        NCBI gene 172777
        RefSeq protein NM_001264177.4
            NM_001264176.4
        SwissProt UniProtAcc H2FLJ1
        UniProt_GCRP UniProtAcc H2FLJ1
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:39 WBPerson1971 Event: Imported: Initial conversion from geneace
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: stl
    Allele (17)
    Legacy_information: [Barnes TM] stl for STomatin-Like. Very close ortholog of a human stomatin-like protein. Predicted gene F30A10.5
    Strain: WBStrain00003182
    RNASeq_FPKM (74)
    GO_annotation: 00021329
      00021330
      00021331
      00021332
      00021333
      00021334
      00113934
    Ortholog (38)
    Paralog: WBGene00003166 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00006063 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00006064 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00006065 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00006066 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00006067 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00006068 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00006741 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00006761 Caenorhabditis elegans From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to be involved in mitochondrion organization. Located in mitochondrion. Expressed in head neurons and pharynx. Is an ortholog of human STOML2 (stomatin like 2). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: F30A10.5a
      F30A10.5b
    Corresponding_CDS_history: F30A10.5:wp90
      F30A10.5:wp229
    Corresponding_transcript: F30A10.5a.1
      F30A10.5b.1
    Other_sequence (75)
    Associated_feature: WBsf649477
      WBsf664758
      WBsf981078
  Experimental_info: RNAi_result (15)
    Expr_pattern: Chronogram1982
      Expr11475
      Expr1016775
      Expr1032536
      Expr1149856
      Expr2016966
      Expr2035114
    Drives_construct: WBCnstr00003658
      WBCnstr00034565
    Construct_product: WBCnstr00018700
      WBCnstr00018701
      WBCnstr00034565
    Microarray_results (21)
    Expression_cluster (140)
    Interaction: WBInteraction000031775
      WBInteraction000156562
      WBInteraction000187737
      WBInteraction000193319
      WBInteraction000196933
      WBInteraction000199843
      WBInteraction000202839
      WBInteraction000206130
      WBInteraction000206579
      WBInteraction000213963
      WBInteraction000219286
      WBInteraction000221650
      WBInteraction000224500
      WBInteraction000228199
      WBInteraction000228208
      WBInteraction000237809
      WBInteraction000251752
      WBInteraction000257245
      WBInteraction000267791
      WBInteraction000273744
      WBInteraction000283496
      WBInteraction000288310
      WBInteraction000292218
      WBInteraction000298037
      WBInteraction000298383
      WBInteraction000307032
      WBInteraction000311223
      WBInteraction000311958
      WBInteraction000314758
      WBInteraction000318534
      WBInteraction000320376
      WBInteraction000324080
      WBInteraction000333333
      WBInteraction000336089
      WBInteraction000338525
      WBInteraction000345386
      WBInteraction000355918
      WBInteraction000359191
      WBInteraction000359779
      WBInteraction000363816
      WBInteraction000378508
      WBInteraction000382951
      WBInteraction000385073
      WBInteraction000388536
      WBInteraction000393924
      WBInteraction000395121
      WBInteraction000400128
      WBInteraction000401420
      WBInteraction000416470
      WBInteraction000421164
      WBInteraction000427409
      WBInteraction000435785
      WBInteraction000446644
      WBInteraction000450072
      WBInteraction000453565
      WBInteraction000465914
      WBInteraction000465915
      WBInteraction000474703
      WBInteraction000521010
      WBInteraction000552840
      WBInteraction000559244
      WBInteraction000560093
      WBInteraction000564296
      WBInteraction000585096
      WBInteraction000586429
  Map_info: Map: I Position: 3.77056 Error: 0.000852
    Positive: Positive_clone: F30A10 Author_evidence: (genomic sequence,
          Inferred_automatically: From sequence, transcript, pseudogene data
    Mapping_data: Multi_point: 4890
        4707
    Pseudo_map_position
  Reference: WBPaper00006465
    WBPaper00030154
    WBPaper00037777
    WBPaper00038491
    WBPaper00043115
    WBPaper00043145
    WBPaper00043532
    WBPaper00044657
    WBPaper00055090
    WBPaper00064339
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene