Questions, Feedback & Help
Send us an email and we'll get back to you ASAP. Or you can read our Frequently Asked Questions.

WormBase Tree Display for Gene: WBGene00005421

expand all nodes | collapse all nodes | view schema

Name Class

WBGene00005421SMapS_parentSequenceCHROMOSOME_V
IdentityVersion1
NameCGC_namesrh-211Person_evidenceWBPerson522
Sequence_nameD1065.5
Molecular_nameD1065.5a
D1065.5a.1
CE09055
D1065.5b
CE51554
D1065.5b.1
Other_nameCELE_D1065.5Accession_evidenceNDBBX284605
Public_namesrh-211
DB_infoDatabaseAceViewgene5E552
WormQTLgeneWBGene00005421
WormFluxgeneWBGene00005421
NDBlocus_tagCELE_D1065.5
PanthergeneCAEEL|WormBase=WBGene00005421|UniProtKB=O16197
familyPTHR22941
NCBIgene183922
RefSeqproteinNM_071736.2
NM_001330827.1
TrEMBLUniProtAccA0A163VU50
O16197
UniProt_GCRPUniProtAccO16197
SpeciesCaenorhabditis elegans
HistoryVersion_change107 Apr 2004 11:29:38WBPerson1971EventImportedInitial conversion from geneace
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classsrh
Allele (71)
RNASeq_FPKM (74)
GO_annotation00002258
Ortholog (28)
Paralog (297)
Structured_descriptionAutomated_descriptionPredicted to be located in membrane. Expressed in PHA and amphid neurons.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSD1065.5a
D1065.5b
Corresponding_transcriptD1065.5a.1
D1065.5b.1
Other_sequenceName_isotig02107
Associated_featureWBsf233554
Experimental_infoRNAi_resultWBRNAi00046738Inferred_automaticallyRNAi_primary
WBRNAi00030354Inferred_automaticallyRNAi_primary
WBRNAi00043402Inferred_automaticallyRNAi_primary
Expr_patternExpr14081
Expr1018133
Expr1147388
Expr2016427
Expr2034635
Drives_constructWBCnstr00034984
Construct_productWBCnstr00034984
Microarray_results (26)
Expression_clusterWBPaper00031040:TGF-beta_adult_upregulated
WBPaper00033444:BacteriaDiet_regulated
WBPaper00037950:A-class-motor-neurons_L1-larva_expressed
WBPaper00037950:all-neurons_L1-larva_expressed
WBPaper00037950:all-neurons_L2-larva_expressed
WBPaper00037950:AVE-neuron_L1-larva_expressed
WBPaper00037950:bodywall-muscle_L2-larva_expressed
WBPaper00037950:coelomocytes_L2-larva_expressed
WBPaper00037950:excretory-cell_L2-larva_expressed
WBPaper00037950:GABAergic-motor-neurons_L2-larva_expressed
WBPaper00037950:glr-1(+)-neurons_L2-larva_expressed
WBPaper00037950:hypodermis_L1-larva_expressed
WBPaper00037950:intestine_L1-larva_expressed
WBPaper00037950:intestine_L2-larva_expressed
WBPaper00037950:pharyngeal-muscle_L1-larva_expressed
WBPaper00038237:age-1_upregulated_intestine_rescue
WBPaper00038237:age-1_upregulated_neuron_rescue
WBPaper00038237:age-1_upregulated_nontransgenic
WBPaper00038438:E.faecalis_24hr_upregulated_RNAseq
WBPaper00038438:P.lumniescens_24hr_upregulated_RNAseq
WBPaper00040209:B.thuringiensis_downregulated_MY15
WBPaper00040990:PA14_downregulated
WBPaper00042477:rsr-2(RNAi)_downregulated_TilingArray
WBPaper00045420:fertilization_downregulated_transcript
WBPaper00045571:germline-ablation_upregulated
WBPaper00050163:chd-3(eh4);let-418(RNAi)_upregulated_100-cell-embryo
WBPaper00050488:20C_vs_25C_regulated_N2_adult
WBPaper00050488:adult_vs_dauer_regulated_N2_20C
WBPaper00050488:mir-34(gk437)_vs_mir-34(OverExpression)_regulated_adult_20C
WBPaper00050488:mir-34(gk437)_vs_mir-34(OverExpression)_regulated_adult_25C
WBPaper00050488:mir-34(OverExpression)_vs_N2_regulated_adult_20C
WBPaper00050488:N2_vs_mir-34(OverExpression)_regulated_adult_25C
WBPaper00050561:indole_10-fold_downregulated
WBPaper00050726:OsmoticStress_regulated_Food
WBPaper00053888:drh-3(rrr2)_upregulated
WBPaper00055013:hmg-3(bar24)_upregulated
WBPaper00055354:eat-2(ad1116)_downregulated
WBPaper00055354:Psora-Allantoin_upregulated
WBPaper00055354:Rapamycin-Metformin_upregulated
WBPaper00055354:Rapamycin-Psora_downregulated
WBPaper00055354:Rapamycin-Rifampicin-Psora_downregulated
WBPaper00055354:Rapamycin-Rifampicin_upregulated
WBPaper00055354:Rapamycin_downregulated
WBPaper00055354:Rifampicin-Allantoin_upregulated
WBPaper00055354:Rifampicin_upregulated
WBPaper00056809:smn-1(ok355)_upregulated
WBPaper00058598:mex-1(or286)_downregulated
WBPaper00058598:mex-3(eu149)_downregulated
WBPaper00058598:spn-4(tm291)_downregulated
WBPaper00059194:klf-1(RNAi)_regulated
WBPaper00059471:EGL-43_interacting
WBPaper00060661:sensory-neuron_enriched
WBPaper00061340:FLP
WBPaper00061340:MC
WBPaper00061527:sre-33-ZK1025.1_8337
WBPaper00062103:neuron_enriched
WBPaper00062325:muscle_enriched_coding-RNA
WBPaper00062497:xpf-1(tm2842)_upregulated
WBPaper00062590:Aging_upregulated_neuron
WBPaper00062672:let-418(n3536)dcp-66(RNAi)_upregulated
WBPaper00064130:Beta-Amyloid_24h_downregulated_mRNA
WBPaper00064769:him-17(me24)_upregulated
WBPaper00065841:58_0
WBPaper00065841:58_1
WBPaper00066110:Doxorubicin_upregulated_tetraploid
cgc4489_group_18
WBPaper00026929:sir-2.1_overexpression_regulated
WBPaper00036286:Pattern_C
WBPaper00040210:Chlorpyrifos_Diazinon_24C_regulated
WBPaper00040858:eQTL_age_regulated_aging
WBPaper00040858:eQTL_regulated_aging
WBPaper00040858:eQTL_regulated_old
WBPaper00041606:CE_X.nematophila_regulated
WBPaper00041939:control_vs_EtBr-exposed_48h
WBPaper00041939:UVC-EtBr-exposed_vs_UVC-exposed_51h
WBPaper00045015:nhr-25(RNAi)_downregulated
WBPaper00045294:50uM_TBBP_downregulated
WBPaper00048989:N2_allantoin_upregulated
Map_infoMapVPosition-6.59994Error0.027363
PositivePositive_cloneD1065Inferred_automaticallyFrom CDS info
From sequence, transcript, pseudogene data
Pseudo_map_position
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene