WormBase Tree Display for Gene: WBGene00004752

WBGene00004752 SMap: S_parent: Sequence: T23G7
  Identity: Version: 1
    Name: CGC_name: sec-5 Person_evidence: WBPerson297
      Sequence_name: T23G7.4
      Molecular_name: T23G7.4
        T23G7.4.1
        CE03705
      Other_name: CELE_T23G7.4 Accession_evidence: NDB BX284602
      Public_name: sec-5
    DB_info: Database: AceView gene 2J464
        WormQTL gene WBGene00004752
        WormFlux gene WBGene00004752
        NDB locus_tag CELE_T23G7.4
        Panther gene CAEEL|WormBase=WBGene00004752|UniProtKB=Q22706
          family PTHR13043
        NCBI gene 174459
        RefSeq protein NM_063557.7
        SwissProt UniProtAcc Q22706
        TREEFAM TREEFAM_ID TF105891
        UniProt_GCRP UniProtAcc Q22706
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:36 WBPerson1971 Event: Imported: Initial conversion from geneace
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: sec
    Allele (58)
    Strain: WBStrain00006437
      WBStrain00007544
      WBStrain00007553
      WBStrain00007654
    RNASeq_FPKM (74)
    GO_annotation: 00076088
      00076089
      00076090
      00076091
      00076092
      00076093
      00113130
      00113131
    Contained_in_operon: CEOP2416
    Ortholog (37)
    Structured_description: Concise_description: The sec-5 gene encodes an ortholog of SEC5 in S. cerevisiae, a component of the exocyst complex required genetically for endocytosis and for normal cellular morphology in the intestine. Paper_evidence: WBPaper00004883
          Curator_confirmed: WBPerson567
          Date_last_updated: 17 Jun 2004 00:00:00
      Automated_description: Predicted to be involved in Golgi to plasma membrane transport and exocytosis. Predicted to be part of exocyst. Expressed in anchor cell; embryonic cell; and excretory canal. Is an ortholog of human EXOC2 (exocyst complex component 2). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: T23G7.4
    Corresponding_transcript: T23G7.4.1
    Other_sequence (51)
    Associated_feature: WBsf650406
      WBsf223612
  Experimental_info: RNAi_result: WBRNAi00035893 Inferred_automatically: RNAi_primary
      WBRNAi00065618 Inferred_automatically: RNAi_primary
      WBRNAi00085602 Inferred_automatically: RNAi_primary
      WBRNAi00081466 Inferred_automatically: RNAi_primary
      WBRNAi00053984 Inferred_automatically: RNAi_primary
      WBRNAi00081458 Inferred_automatically: RNAi_primary
    Expr_pattern: Chronogram1260
      Expr6754
      Expr11912
      Expr13678
      Expr1016267
      Expr1032349
      Expr1157529
      Expr2015718
      Expr2033950
    Drives_construct: WBCnstr00003479
      WBCnstr00019549
      WBCnstr00019551
      WBCnstr00035410
    Construct_product: WBCnstr00019549
      WBCnstr00019551
      WBCnstr00035410
    Microarray_results (19)
    Expression_cluster (91)
    Interaction (16)
  Map_info: Map: II Position: 1.08515 Error: 0.001275
    Positive: Positive_clone: T23G7 Inferred_automatically: From CDS info
            From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference (15)
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene