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WormBase Tree Display for Gene: WBGene00004349

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Name Class

WBGene00004349SMapS_parentSequenceC41G11
IdentityVersion2
NameCGC_namergs-6Person_evidenceWBPerson330
Sequence_nameC41G11.3
Molecular_nameC41G11.3a
C41G11.3a.1
CE50026
C41G11.3b
CE49999
C41G11.3a.2
C41G11.3a.3
C41G11.3b.1
Other_nameCELE_C41G11.3Accession_evidenceNDBBX284606
Public_namergs-6
DB_infoDatabaseAceViewgeneXG340
WormQTLgeneWBGene00004349
WormFluxgeneWBGene00004349
NDBlocus_tagCELE_C41G11.3
PanthergeneCAEEL|WormBase=WBGene00004349|UniProtKB=Q18563
familyPTHR10845
NCBIgene180840
RefSeqproteinNM_001307891.4
NM_001307892.4
SwissProtUniProtAccQ18563
UniProt_GCRPUniProtAccQ18563
SpeciesCaenorhabditis elegans
HistoryVersion_change107 Apr 2004 11:29:35WBPerson1971EventImportedInitial conversion from geneace
203 Dec 2004 16:41:47WBPerson2970EventAcquires_mergeWBGene00016569
Acquires_mergeWBGene00016569
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classrgs
Allele (240)
StrainWBStrain00026364
RNASeq_FPKM (74)
GO_annotation00061662
00112702
Ortholog (35)
ParalogWBGene00001145Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00001179Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00004344Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00004345Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00004347Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00004350Caenorhabditis elegansFrom_analysisWormBase-Compara
Structured_description (2)
Disease_infoPotential_modelDOID:585Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:9996)
Molecular_infoCorresponding_CDSC41G11.3a
C41G11.3b
Corresponding_CDS_historyC41G11.3:wp222
C41G11.3:wp244
Corresponding_transcriptC41G11.3a.1
C41G11.3a.2
C41G11.3a.3
C41G11.3b.1
Other_sequence (25)
Associated_feature (12)
Experimental_infoRNAi_resultWBRNAi00042296Inferred_automaticallyRNAi_primary
WBRNAi00011837Inferred_automaticallyRNAi_primary
WBRNAi00042297Inferred_automaticallyRNAi_primary
WBRNAi00011836Inferred_automaticallyRNAi_primary
WBRNAi00029726Inferred_automaticallyRNAi_primary
Expr_patternExpr1028228
Expr1032167
Expr1146287
Expr2015329
Expr2033563
Drives_constructWBCnstr00035548
Construct_productWBCnstr00035548
Microarray_results (21)
Expression_cluster (181)
InteractionWBInteraction000238889
WBInteraction000239010
WBInteraction000281121
WBInteraction000293836
WBInteraction000331002
WBInteraction000402075
WBInteraction000414237
Map_infoMapXPosition-4.38493Error0.002604
PositivePositive_cloneC41G11Inferred_automaticallyFrom sequence, transcript, pseudogene data
Mapping_dataMulti_point5034
Pseudo_map_position
ReferenceWBPaper00004281
WBPaper00011274
WBPaper00031448
WBPaper00038491
WBPaper00064400
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene