WormBase Tree Display for Gene: WBGene00004306

WBGene00004306 SMap: S_parent: Sequence: R12C12
  Identity: Version: 1
    Name: CGC_name: ran-5
      Sequence_name: R12C12.2
      Molecular_name: R12C12.2
        R12C12.2.1
        CE02847
      Other_name: CELE_R12C12.2 Accession_evidence: NDB BX284602
      Public_name: ran-5
    DB_info: Database: AceView gene 2G339
        WormQTL gene WBGene00004306
        WormFlux gene WBGene00004306
        NDB locus_tag CELE_R12C12.2
        Panther gene CAEEL|WormBase=WBGene00004306|UniProtKB=Q21961
          family PTHR23138
        NCBI gene 174011
        RefSeq protein NM_062807.9
        TREEFAM TREEFAM_ID TF313181
        TrEMBL UniProtAcc Q21961
        UniProt_GCRP UniProtAcc Q21961
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:34 WBPerson1971 Event: Imported: Initial conversion from geneace
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: ran
    Allele (23)
    Strain: WBStrain00051355
    RNASeq_FPKM (74)
    GO_annotation: 00073506
      00073507
      00073508
      00112639
    Ortholog (37)
    Paralog: WBGene00003795 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00003802 Caenorhabditis elegans From_analysis: Panther
    Structured_description: Concise_description: ran-5 encodes a protein containing a RanBP1 domain, domains which are predicted to interact with Ran proteins to inhibit dissociation of GTP and to stimulate GAP-mediated GTP hydrolysis by Ran, that affects body morphology, locomotion, and embryonic viability. Paper_evidence: WBPaper00006395
          Curator_confirmed: WBPerson48
          Date_last_updated: 17 Jun 2004 00:00:00
      Automated_description: Predicted to contribute to GTPase activator activity. Predicted to be involved in intracellular transport. Predicted to be located in cytoplasm. Predicted to be part of nuclear pore. Is an ortholog of human RANBP3 (RAN binding protein 3). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: R12C12.2
    Corresponding_transcript: R12C12.2.1
    Other_sequence: CSC00655_1
      FD516002.1
      CJC00757_1
      CRC03720_1
      CR01266
      CBC12363_1
    Associated_feature: WBsf644251
      WBsf988050
      WBsf221385
      WBsf221386
  Experimental_info: RNAi_result: WBRNAi00073238 Inferred_automatically: RNAi_primary
      WBRNAi00073239 Inferred_automatically: RNAi_primary
      WBRNAi00061534 Inferred_automatically: RNAi_primary
      WBRNAi00034882 Inferred_automatically: RNAi_primary
      WBRNAi00017791 Inferred_automatically: RNAi_primary
      WBRNAi00027441 Inferred_automatically: RNAi_primary
      WBRNAi00051836 Inferred_automatically: RNAi_primary
      WBRNAi00026097 Inferred_automatically: RNAi_primary
      WBRNAi00061049 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1015648
      Expr1032131
      Expr1155497
      Expr2015254
      Expr2033488
    Drives_construct: WBCnstr00035576
    Construct_product: WBCnstr00035576
    Microarray_results (22)
    Expression_cluster (93)
    Interaction (55)
  Map_info: Map: II Position: -0.599869 Error: 0.011187
    Positive: Positive_clone: R12C12 Inferred_automatically: From CDS info
            From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00026736
    WBPaper00038491
    WBPaper00055090
  Remark: Sequence connection from [Askjaer P, Mattaj IW]. krb 13/11/01
    Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene