WormBase Tree Display for Gene: WBGene00003795
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| WBGene00003795 | SMap | S_parent | Sequence | F59A2 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | npp-9 | Person_evidence | WBPerson1780 | |||||
| Sequence_name | F59A2.1 | ||||||||
| Molecular_name | F59A2.1a | ||||||||
| F59A2.1a.1 | |||||||||
| CE17939 | |||||||||
| F59A2.1b | |||||||||
| CE33525 | |||||||||
| F59A2.1a.2 | |||||||||
| F59A2.1b.1 | |||||||||
| Other_name | Nup358 | Paper_evidence | WBPaper00026834 | ||||||
| CELE_F59A2.1 | Accession_evidence | NDB | BX284603 | ||||||
| Public_name | npp-9 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:33 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | npp | ||||||||
| Allele (66) | |||||||||
| Possibly_affected_by | WBVar02153243 | ||||||||
| Strain | WBStrain00037569 | ||||||||
| WBStrain00050853 | |||||||||
| WBStrain00054781 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00070018 | ||||||||
| 00070019 | |||||||||
| 00070020 | |||||||||
| 00070021 | |||||||||
| 00070022 | |||||||||
| 00083277 | |||||||||
| 00083278 | |||||||||
| 00083279 | |||||||||
| 00083280 | |||||||||
| 00111816 | |||||||||
| Ortholog (41) | |||||||||
| Paralog | WBGene00003802 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WBGene00004306 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| Structured_description | Automated_description | Predicted to enable metal ion binding activity. Predicted to contribute to GTPase activator activity. Involved in embryo development and nucleus organization. Part of nuclear pore. Human ortholog(s) of this gene implicated in brain disease; inflammatory myofibroblastic tumor; and multiple myeloma. Is an ortholog of human RANBP2 (RAN binding protein 2). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:0050905 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:9848) | ||||
| DOID:936 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:9848) | ||||||
| DOID:9538 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:9848) | ||||||
| Molecular_info | Corresponding_CDS | F59A2.1a | |||||||
| F59A2.1b | |||||||||
| Corresponding_transcript | F59A2.1a.1 | ||||||||
| F59A2.1a.2 | |||||||||
| F59A2.1b.1 | |||||||||
| Other_sequence (54) | |||||||||
| Associated_feature | WBsf650902 | ||||||||
| WBsf650903 | |||||||||
| WBsf650904 | |||||||||
| WBsf666638 | |||||||||
| WBsf981431 | |||||||||
| WBsf991755 | |||||||||
| WBsf226342 | |||||||||
| WBsf226343 | |||||||||
| WBsf226344 | |||||||||
| Experimental_info | RNAi_result (39) | ||||||||
| Expr_pattern | Expr9022 | ||||||||
| Expr1014944 | |||||||||
| Expr1031781 | |||||||||
| Expr1152834 | |||||||||
| Expr2014394 | |||||||||
| Expr2032635 | |||||||||
| Construct_product | WBCnstr00006023 | ||||||||
| WBCnstr00009708 | |||||||||
| WBCnstr00009709 | |||||||||
| WBCnstr00013679 | |||||||||
| WBCnstr00022447 | |||||||||
| WBCnstr00042030 | |||||||||
| Antibody | WBAntibody00002131 | ||||||||
| Microarray_results (28) | |||||||||
| Expression_cluster (179) | |||||||||
| Interaction (362) | |||||||||
| Map_info | Map | III | Position | -6.97528 | Error | 0.012592 | |||
| Positive | Positive_clone | F59A2 | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Pseudo_map_position | |||||||||
| Reference (15) | |||||||||
| Remark | Sequence connection from [Askjaer P, Mattaj IW]. krb 13/11/01 | ||||||||
| Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
| Method | Gene |
