WormBase Tree Display for Gene: WBGene00004256

WBGene00004256 Evidence: Person_evidence: WBPerson345
  SMap: S_parent: Sequence: ZK994
  Identity: Version: 2
    Name: CGC_name: pxn-1 Person_evidence: WBPerson345
      Sequence_name: ZK994.3
      Molecular_name: ZK994.3
        ZK994.3.1
        CE40298
      Other_name: CELE_ZK994.3 Accession_evidence: NDB BX284605
      Public_name: pxn-1
    DB_info: Database (12)
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:34 WBPerson1971 Event: Imported: Initial conversion from geneace
        2 26 May 2006 16:35:34 WBPerson1849 Event: Acquires_merge: WBGene00022841
      Acquires_merge: WBGene00022841
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: pxn
    Allele (85)
    Strain: WBStrain00031626
      WBStrain00050780
    RNASeq_FPKM (74)
    GO_annotation (19)
    Ortholog: WBGene00053095 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00024751 Caenorhabditis briggsae From_analysis: OrthoMCL
            OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00037136 Caenorhabditis briggsae From_analysis: OrthoMCL
      WBGene00143891 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00100463 Pristionchus pacificus From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00163489 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            WormBase-Compara
      WBGene00136416 Caenorhabditis japonica From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00227866 Brugia malayi From_analysis: WormBase-Compara
      WBGene00231273 Brugia malayi From_analysis: WormBase-Compara
      CBOVI.g2158 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g1147 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g3071 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g8827 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g5604 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g26201 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g1086 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g1536 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g13764 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP39.g18617 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP39.g7381 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g2856 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_00106.g4493 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cang_2012_03_13_00106.g4494 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cang_2012_03_13_00106.g4500 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cang_2012_03_13_11459.g23249 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cni-pxn-1 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold630.g22300 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_00220.g7337 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_17020 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_018855 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g00383 Oscheius tipulae From_analysis: WormBase-Compara
      Pan_g9134 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_50114200 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrV_pilon.g15000 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00241715 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00243881 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00112475 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00272734 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00258032 Strongyloides ratti From_analysis: WormBase-Compara
      WBGene00285492 Trichuris muris From_analysis: WormBase-Compara
      FB:FBgn0011828 Drosophila melanogaster From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            SonicParanoid
      ZFIN:ZDB-GENE-030131-9460 Danio rerio From_analysis: EnsEMBL-Compara
            OrthoFinder
            Panther
      HGNC:6678 Homo sapiens From_analysis: EnsEMBL-Compara
            OrthoFinder
            Panther
      HGNC:7218 Homo sapiens From_analysis: EnsEMBL-Compara
            OrthoFinder
            Panther
      HGNC:14966 Homo sapiens From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      HGNC:3423 Homo sapiens From_analysis: EnsEMBL-Compara
            OrthoFinder
            Panther
      HGNC:26359 Homo sapiens From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      MGI:107569 Mus musculus From_analysis: EnsEMBL-Compara
            OrthoFinder
            Panther
      MGI:97137 Mus musculus From_analysis: EnsEMBL-Compara
            OrthoFinder
            Panther
      MGI:1916925 Mus musculus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      MGI:1923363 Mus musculus From_analysis: EnsEMBL-Compara
            OrthoFinder
            Panther
      RGD:1310051 Rattus norvegicus From_analysis: EnsEMBL-Compara
            OrthoFinder
            Panther
      RGD:1592081 Rattus norvegicus From_analysis: EnsEMBL-Compara
            OrthoFinder
            Panther
      RGD:1311882 Rattus norvegicus From_analysis: EnsEMBL-Compara
            OrthoFinder
            Panther
      RGD:1560694 Rattus norvegicus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
    Paralog: WBGene00004257 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
      WBGene00009897 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
      WBGene00022743 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
      WBGene00015841 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
      WBGene00017968 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
      WBGene00019970 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
      WBGene00008627 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
      WBGene00019613 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
      WBGene00016700 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
      WBGene00011530 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
    Structured_description: Automated_description: Predicted to enable peroxidase activity. Involved in muscle attachment and positive regulation of axon guidance. Located in basement membrane. Expressed in several structures, including egg-laying apparatus; excretory cell; intestine; somatic nervous system; and spermathecal-uterine valve cell. Human ortholog(s) of this gene implicated in several diseases, including Alzheimer's disease 1; asthma (multiple); kidney failure (multiple); and lung disease (multiple). Is an ortholog of human PXDN (peroxidasin) and PXDNL (peroxidasin like). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Disease_info: Potential_model (21)
  Molecular_info: Corresponding_CDS: ZK994.3
    Corresponding_CDS_history: ZK994.3:wp112
      ZK994.3:wp159
    Corresponding_transcript: ZK994.3.1
    Other_sequence (12)
    Associated_feature (18)
  Experimental_info: RNAi_result: WBRNAi00059883 Inferred_automatically: RNAi_primary
      WBRNAi00022255 Inferred_automatically: RNAi_primary
      WBRNAi00038524 Inferred_automatically: RNAi_primary
      WBRNAi00022256 Inferred_automatically: RNAi_primary
      WBRNAi00038525 Inferred_automatically: RNAi_primary
      WBRNAi00059882 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr12146
      Expr12147
      Expr1018057
      Expr1032099
      Expr1163304
      Expr2015200
      Expr2033434
    Drives_construct: WBCnstr00020277
      WBCnstr00020279
      WBCnstr00035607
    Construct_product: WBCnstr00020279
      WBCnstr00035607
    Microarray_results (24)
    Expression_cluster (163)
    Interaction (49)
  Map_info: Map: V Position: 1.43195 Error: 0.002031
    Positive: Positive_clone: ZK994 Inferred_automatically: From CDS info
            From sequence, transcript, pseudogene data
    Mapping_data: Multi_point: 4596
    Pseudo_map_position
  Reference (11)
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene