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WormBase Tree Display for Gene: WBGene00053095

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Name Class

WBGene00053095SMapS_parentSequenceCrem_Contig13
IdentityVersion3
NameCGC_nameCre-pxn-1From_analysisInferred_from_orthology
Sequence_nameCRE05538
Molecular_nameCRE05538
CRE05538.1
RP34933
Other_namecr01.sctg1.wum.951
Public_nameCre-pxn-1
SpeciesCaenorhabditis remanei
HistoryVersion_change109 Nov 2007 10:19:25WBPerson1847EventCreated
229 Nov 2007 17:00:48WBPerson2970Name_changeCGC_nameCre-pxn-1
303 Jul 2008 11:44:40WBPerson4055EventImportedfrom NGASP
Name_changeSequence_nameCRE05538
Other_namecr01.sctg1.wum.951
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classpxn
RNASeq_FPKMWBls:00000042.01327From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
2.06255From_analysisRNASeq.remanei.WBls:0000004.control_mean
RNASeq.remanei.WBls:0000004.control_median
2.11182From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
WBls:0000024 (53)
WBls:000002721.4418From_analysisRNASeq.remanei.WBls:0000027.control_mean
23.6119From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
2.57009From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
25.9583From_analysisRNASeq.remanei.WBls:0000027.control_median
28.3047From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
31.2806From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
WBls:000003819.4764From_analysisRNASeq.remanei.WBls:0000038.control_mean
26.9788From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
RNASeq.remanei.WBls:0000038.control_median
27.9546From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
3.49578From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
WBls:00000415.48511From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
6.27023From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
6.36005From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
6.51409From_analysisRNASeq.remanei.WBls:0000041.control_median
6.66814From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
6.8297From_analysisRNASeq.remanei.WBls:0000041.control_mean
7.888From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
8.30664From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
WBls:0000063 (12)
WBls:000010117.0589From_analysisRNASeq.remanei.total_over_all_stages.control_mean
23.453From_analysisRNASeq.remanei.total_over_all_stages.control_median
GO_annotation00148288
00148289
00148290
Ortholog (39)
Paralog (12)
Structured_descriptionAutomated_descriptionPredicted to enable heme binding activity and peroxidase activity. Predicted to be involved in response to oxidative stress. Is an ortholog of C. elegans pxn-1. In C. elegans, pxn-1 is involved in muscle attachment and positive regulation of axon guidance.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCRE05538
Corresponding_transcriptCRE05538.1
Other_sequence (16)
Experimental_infoExpr_patternExpr1096267
Microarray_resultsGPL14146_CRE05538_3046-3105_0.804_71_C
GPL14146_CRE05538_3342-3401_0.864_25_A
GPL14146_CRE05538_3516-3575_0.919_3_B
MethodGene