WormBase Tree Display for Gene: WBGene00004029
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| WBGene00004029 | SMap | S_parent | Sequence | K09B11 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | pik-1 | Person_evidence | WBPerson1122 | |||||
| Sequence_name | K09B11.1 | ||||||||
| Molecular_name | K09B11.1a | ||||||||
| K09B11.1a.1 | |||||||||
| CE31033 | |||||||||
| K09B11.1b | |||||||||
| CE45959 | |||||||||
| K09B11.1a.2 | |||||||||
| K09B11.1b.1 | |||||||||
| K09B11.1c | |||||||||
| Other_name | CELE_K09B11.1 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | pik-1 | ||||||||
| DB_info | Database (15) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:33 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| 2 | 15 Aug 2011 12:02:42 | WBPerson4025 | Event | Acquires_merge | WBGene00206467 | ||||
| Acquires_merge | WBGene00206467 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | pik | ||||||||
| Allele (149) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (22) | |||||||||
| Contained_in_operon | CEOP4552 | ||||||||
| Ortholog (42) | |||||||||
| Paralog (12) | |||||||||
| Structured_description | Concise_description | The pik-1 gene encodes a pelle/IRAK kinase homolog that may be involved in apoptosis. | Paper_evidence | WBPaper00004589 | |||||
| Curator_confirmed | WBPerson567 | ||||||||
| Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
| Automated_description | Predicted to enable ATP binding activity; protein serine kinase activity; and protein serine/threonine kinase activity. Predicted to be involved in cellular response to lipopolysaccharide and signal transduction. Predicted to be located in cytoplasm; nucleus; and plasma membrane. Expressed in RMGL; RMGR; and nervous system. Human ortholog(s) of this gene implicated in several diseases, including autoimmune disease of musculoskeletal system (multiple); diffuse scleroderma; and melioidosis. Is an ortholog of human IRAK1 (interleukin 1 receptor associated kinase 1). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:612 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:17967) | ||||
| DOID:9008 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:6112) | ||||||
| DOID:7147 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:6112) | ||||||
| DOID:8893 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:6112) | ||||||
| DOID:399 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:17020) | ||||||
| DOID:2841 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:17020) | ||||||
| DOID:1580 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:6112) | ||||||
| DOID:1749 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:6112) | ||||||
| DOID:5052 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:17020) | ||||||
| Molecular_info | Corresponding_CDS | K09B11.1a | |||||||
| K09B11.1b | |||||||||
| Corresponding_CDS_history | K09B11.1:wp80 | ||||||||
| Corresponding_transcript | K09B11.1c | ||||||||
| K09B11.1a.1 | |||||||||
| K09B11.1a.2 | |||||||||
| K09B11.1b.1 | |||||||||
| Other_sequence (35) | |||||||||
| Associated_feature | WBsf998403 | ||||||||
| WBsf998404 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00112978 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00016868 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00113208 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00034179 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00075962 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00050370 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr13217 | ||||||||
| Expr1010645 | |||||||||
| Expr1031931 | |||||||||
| Expr1154076 | |||||||||
| Expr2014927 | |||||||||
| Expr2033162 | |||||||||
| Drives_construct | WBCnstr00038894 | ||||||||
| Construct_product | WBCnstr00038894 | ||||||||
| Microarray_results (22) | |||||||||
| Expression_cluster (63) | |||||||||
| Interaction (320) | |||||||||
| WBProcess | WBbiopr:00000039 | ||||||||
| Map_info | Map | IV | Position | 9.21545 | Error | 0.07179 | |||
| Positive | Positive_clone | K09B11 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Mapping_data | Multi_point | 4585 | |||||||
| 4914 | |||||||||
| Pseudo_map_position | |||||||||
| Reference (14) | |||||||||
| Remark | Sequence given as K09B11 BUT subsequence not given [sdm] | ||||||||
| Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
| Method | Gene |
