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WormBase Tree Display for Gene: WBGene00004029

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Name Class

WBGene00004029SMapS_parentSequenceK09B11
IdentityVersion2
NameCGC_namepik-1Person_evidenceWBPerson1122
Sequence_nameK09B11.1
Molecular_nameK09B11.1a
K09B11.1a.1
CE31033
K09B11.1b
CE45959
K09B11.1a.2
K09B11.1b.1
K09B11.1c
Other_nameCELE_K09B11.1Accession_evidenceNDBBX284604
Public_namepik-1
DB_infoDatabase (15)
SpeciesCaenorhabditis elegans
HistoryVersion_change107 Apr 2004 11:29:33WBPerson1971EventImportedInitial conversion from geneace
215 Aug 2011 12:02:42WBPerson4025EventAcquires_mergeWBGene00206467
Acquires_mergeWBGene00206467
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classpik
Allele (149)
RNASeq_FPKM (74)
GO_annotation (22)
Contained_in_operonCEOP4552
OrthologWBGene00062774Caenorhabditis remaneiFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00074176Caenorhabditis remaneiFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00024957Caenorhabditis briggsaeFrom_analysisHillier-set
OrthoMCL
OMA
Inparanoid_8
WormBase-Compara
WBGene00157294Caenorhabditis brenneriFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00143171Caenorhabditis brenneriFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00225206Brugia malayiFrom_analysisWormBase-Compara
CBOVI.g8721Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g8296Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g13702Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g13880Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g7016Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g5247Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g14460Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g6775Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g3526Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g9952Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_01102.g15685Caenorhabditis angariaFrom_analysisWormBase-Compara
Cnig_chr_IV.g14548Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold589.g5026Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_00422.g11152Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_16029Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_014551Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g04542Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g7292Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_40132100Caenorhabditis inopinataFrom_analysisWormBase-Compara
chrIV_pilon.g12301Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00122161Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00241507Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00106112Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00268168Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00293573Trichuris murisFrom_analysisWormBase-Compara
WBGene00296175Trichuris murisFrom_analysisWormBase-Compara
FB:FBgn0010441Drosophila melanogasterFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
ZFIN:ZDB-GENE-060503-710Danio rerioFrom_analysisEnsEMBL-Compara
Inparanoid
OrthoFinder
OrthoInspector
PhylomeDB
SonicParanoid
ZFIN:ZDB-GENE-071116-5Danio rerioFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OrthoFinder
OrthoInspector
SonicParanoid
HGNC:6112Homo sapiensFrom_analysisEnsEMBL-Compara
Hieranoid
OrthoFinder
OrthoInspector
PhylomeDB
HGNC:17020Homo sapiensFrom_analysisEnsEMBL-Compara
OrthoFinder
PhylomeDB
HGNC:17967Homo sapiensFrom_analysisInparanoid
OrthoInspector
SonicParanoid
MGI:107420Mus musculusFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OrthoFinder
OrthoInspector
PhylomeDB
SonicParanoid
MGI:1921164Mus musculusFrom_analysisEnsEMBL-Compara
OMA
OrthoFinder
RGD:1308846Rattus norvegicusFrom_analysisEnsEMBL-Compara
OMA
OrthoFinder
PhylomeDB
RGD:1563841Rattus norvegicusFrom_analysisEnsEMBL-Compara
Hieranoid
OrthoFinder
PhylomeDB
Paralog (12)
Structured_descriptionConcise_descriptionThe pik-1 gene encodes a pelle/IRAK kinase homolog that may be involved in apoptosis.Paper_evidenceWBPaper00004589
Curator_confirmedWBPerson567
Date_last_updated17 Jun 2004 00:00:00
Automated_descriptionPredicted to enable ATP binding activity; protein serine kinase activity; and protein serine/threonine kinase activity. Predicted to be involved in cellular response to lipopolysaccharide and signal transduction. Predicted to be located in cytoplasm; nucleus; and plasma membrane. Expressed in RMGL; RMGR; and nervous system. Human ortholog(s) of this gene implicated in several diseases, including autoimmune disease of musculoskeletal system (multiple); diffuse scleroderma; and melioidosis. Is an ortholog of human IRAK1 (interleukin 1 receptor associated kinase 1).Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Disease_infoPotential_modelDOID:612Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:17967)
DOID:9008Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:6112)
DOID:7147Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:6112)
DOID:8893Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:6112)
DOID:399Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:17020)
DOID:2841Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:17020)
DOID:1580Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:6112)
DOID:1749Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:6112)
DOID:5052Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:17020)
Molecular_infoCorresponding_CDSK09B11.1a
K09B11.1b
Corresponding_CDS_historyK09B11.1:wp80
Corresponding_transcriptK09B11.1c
K09B11.1a.1
K09B11.1a.2
K09B11.1b.1
Other_sequence (35)
Associated_featureWBsf998403
WBsf998404
Experimental_infoRNAi_resultWBRNAi00112978Inferred_automaticallyRNAi_primary
WBRNAi00016868Inferred_automaticallyRNAi_primary
WBRNAi00113208Inferred_automaticallyRNAi_primary
WBRNAi00034179Inferred_automaticallyRNAi_primary
WBRNAi00075962Inferred_automaticallyRNAi_primary
WBRNAi00050370Inferred_automaticallyRNAi_primary
Expr_patternExpr13217
Expr1010645
Expr1031931
Expr1154076
Expr2014927
Expr2033162
Drives_constructWBCnstr00038894
Construct_productWBCnstr00038894
Microarray_results (22)
Expression_cluster (63)
Interaction (320)
WBProcessWBbiopr:00000039
Map_infoMapIVPosition9.21545Error0.07179
PositivePositive_cloneK09B11Inferred_automaticallyFrom sequence, transcript, pseudogene data
Mapping_dataMulti_point4585
4914
Pseudo_map_position
Reference (14)
RemarkSequence given as K09B11 BUT subsequence not given [sdm]
Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene