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WormBase Tree Display for Gene: WBGene00004008

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Name Class

WBGene00004008SMapS_parentSequenceF22E10
IdentityVersion1
NameCGC_namepgp-14Person_evidenceWBPerson490
Sequence_nameF22E10.3
Molecular_nameF22E10.3
F22E10.3.1
CE03262
Other_nameCELE_F22E10.3Accession_evidenceNDBBX284606
Public_namepgp-14
DB_infoDatabase (10)
SpeciesCaenorhabditis elegans
HistoryVersion_change107 Apr 2004 11:29:33WBPerson1971EventImportedInitial conversion from geneace
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classpgp
Allele (62)
StrainWBStrain00001996
WBStrain00032692
RNASeq_FPKM (74)
GO_annotation (13)
Contained_in_operonCEOPX110
OrthologWBGene00051161Caenorhabditis remaneiFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00023572Caenorhabditis briggsaeFrom_analysisOrthoMCL
WBGene00023573Caenorhabditis briggsaeFrom_analysisOrthoMCL
OMA
Inparanoid_8
WormBase-Compara
WBGene00023575Caenorhabditis briggsaeFrom_analysisOrthoMCL
WBGene00023577Caenorhabditis briggsaeFrom_analysisOrthoMCL
WBGene00026762Caenorhabditis briggsaeFrom_analysisOrthoMCL
WBGene00028069Caenorhabditis briggsaeFrom_analysisOrthoMCL
WBGene00033821Caenorhabditis briggsaeFrom_analysisOrthoMCL
WBGene00034135Caenorhabditis briggsaeFrom_analysisOrthoMCL
WBGene00034271Caenorhabditis briggsaeFrom_analysisOrthoMCL
WBGene00037005Caenorhabditis briggsaeFrom_analysisOrthoMCL
WBGene00037006Caenorhabditis briggsaeFrom_analysisOrthoMCL
WBGene00037161Caenorhabditis briggsaeFrom_analysisOrthoMCL
WBGene00037162Caenorhabditis briggsaeFrom_analysisOrthoMCL
WBGene00037165Caenorhabditis briggsaeFrom_analysisOrthoMCL
WBGene00143870Caenorhabditis brenneriFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00124556Caenorhabditis japonicaFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
WBGene00091572Pristionchus pacificusFrom_analysisOMA
CBOVI.g8689Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g10984Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP21.g10988Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP21.g10989Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP21.g9947Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g14001Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g17720Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g4467Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g21416Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g13854Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g17766Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g29773Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g12125Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00915.g14910Caenorhabditis angariaFrom_analysisWormBase-Compara
Cnig_chr_X.g25030Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold630.g18812Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_00019.g1169Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_03366Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_024956Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g10284Oscheius tipulaeFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g14528Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g4627Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_X0221600Caenorhabditis inopinataFrom_analysisWormBase-Compara
chrX_pilon.g20305Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00099187Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00264558Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00266875Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00267051Strongyloides rattiFrom_analysisWormBase-Compara
FB:FBgn0004512Drosophila melanogasterFrom_analysisEnsEMBL-Compara
Panther
PhylomeDB
FB:FBgn0010241Drosophila melanogasterFrom_analysisEnsEMBL-Compara
OrthoFinder
PhylomeDB
FB:FBgn0035695Drosophila melanogasterFrom_analysisOrthoFinder
Panther
PhylomeDB
FB:FBgn0004513Drosophila melanogasterFrom_analysisOrthoFinder
Panther
PhylomeDB
HGNC:40Homo sapiensFrom_analysisEnsEMBL-Compara
OrthoFinder
PhylomeDB
HGNC:45Homo sapiensFrom_analysisEnsEMBL-Compara
OrthoFinder
PhylomeDB
HGNC:46Homo sapiensFrom_analysisEnsEMBL-Compara
OrthoFinder
PhylomeDB
Paralog (24)
Structured_descriptionConcise_descriptionpgp-14 encodes a member of the ABC transporter family with high similarity to the vertebrate MDR (multidrug resistance) family; PGP-14 is predicted to function as a transmembrane protein that couples energy to transport of various molecules across membranes, but as loss of pgp-14 activity via large-scale RNAi screens does not result in any obvious defects, the precise role of pgp-14 in C. elegans development and/or behavior is not yet known; pgp-14 promoter-gfp fusion proteins are expressed in larvae and adults in the anterior pharynx.Paper_evidenceWBPaper00006421
WBPaper00006525
WBPaper00024561
Curator_confirmedWBPerson48
WBPerson1843
Date_last_updated07 Mar 2006 00:00:00
Automated_descriptionPredicted to enable ATPase-coupled transmembrane transporter activity. Involved in response to nematicide. Predicted to be located in membrane. Human ortholog(s) of this gene implicated in several diseases, including autoimmune disease (multiple); carcinoma (multiple); and hematologic cancer (multiple). Is an ortholog of human ABCB1 (ATP binding cassette subfamily B member 1); ABCB4 (ATP binding cassette subfamily B member 4); and ABCB5 (ATP binding cassette subfamily B member 5).Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Disease_infoPotential_model (39)
Molecular_infoCorresponding_CDSF22E10.3
Corresponding_transcriptF22E10.3.1
Other_sequenceJI168113.1
JI235600.1
JI231282.1
JI164894.1
Acan_isotig21429
JI218053.1
CJC02657_1
ASC19568_1
JI241304.1
Associated_featureWBsf238081
WBsf238082
WBsf238083
Experimental_infoRNAi_resultWBRNAi00045324Inferred_automaticallyRNAi_primary
WBRNAi00000347Inferred_automaticallyRNAi_primary
WBRNAi00077361Inferred_automaticallyRNAi_primary
WBRNAi00013753Inferred_automaticallyRNAi_primary
Expr_patternExpr3326
Expr3327
Expr4618
Expr5828
Expr1031917
Expr1149248
Expr2014867
Expr2033102
Drives_constructWBCnstr00002780
WBCnstr00011322
WBCnstr00011323
WBCnstr00012122
WBCnstr00035743
Construct_productWBCnstr00035743
Microarray_results (16)
Expression_cluster (235)
Interaction (33)
Map_infoMapXPosition8.21375Error0.008856
PositivePositive_cloneF22E10Inferred_automaticallyFrom CDS info
From sequence, transcript, pseudogene data
Pseudo_map_position
Reference (12)
RemarkSequence connection from [Sheps JA, Baillie DL] [040902 ck1]
Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene