WormBase Tree Display for CDS: F22E10.3
expand all nodes | collapse all nodes | view schema
F22E10.3 | Evidence | Inferred_automatically | make_isoforms.pl | ||
---|---|---|---|---|---|
SMap | S_parent | Sequence | F22E10 | ||
Structure | Source_exons | 1 | 69 | ||
123 | 332 | ||||
593 | 951 | ||||
1004 | 1175 | ||||
1223 | 2469 | ||||
2519 | 2942 | ||||
2994 | 4295 | ||||
4349 | 4549 | ||||
DB_info | Database | TrEMBL | UniProtAcc | G5EG61 | |
UniProt | UniProtAcc | G5EG61 | |||
UniProt_GCRP | UniProtAcc | G5EG61 | |||
AlphaFold | entry | G5EG61 | |||
NCBI_protein | GI_number | GI:3876293 | |||
Protein_id | CHROMOSOME_X | CAA91801 | 1 | ||
DB_remark | PGP-14 protein; contains similarity to Pfam domains PF00005 (ABC transporter), PF00664 (ABC transporter transmembrane region); contains similarity to Interpro domains IPR011527 (ABC transporter type 1, transmembrane domain), IPR027417 (P-loop containing nucleoside triphosphate hydrolase), IPR039421 (Type 1 protein exporter), IPR003439 (ABC transporter-like, ATP-binding domain), IPR036640 (ABC transporter type 1, transmembrane domain superfamily), IPR003593 (AAA+ ATPase domain) | ||||
Origin | From_laboratory | HX | |||
Species | Caenorhabditis elegans | ||||
Properties | Coding | CDS | |||
Prediction_status | Confirmed | ||||
Visible | Gene | WBGene00004008 | |||
Corresponding_transcript | F22E10.3.1 | ||||
Corresponding_protein | CE03262 | ||||
Corresponding_PCR_product | cenix:53-e8 | ||||
mv_F22E10.3 | |||||
sjj_F22E10.3 | |||||
Corresponding_oligo_set (11) | |||||
Matching_cDNA (28) | |||||
RNAi_result | WBRNAi00045324 | ||||
WBRNAi00000347 | |||||
WBRNAi00077361 | |||||
WBRNAi00013753 | |||||
Microarray_results (12) | |||||
RNASeq_FPKM (74) | |||||
Associated_feature | WBsf006401 | ||||
Method | curated |