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WormBase Tree Display for Gene: WBGene00003959

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Name Class

WBGene00003959SMapS_parentSequenceY116F11B
IdentityVersion1
NameCGC_namepcp-4Person_evidenceWBPerson564
Sequence_nameY116F11B.3
Molecular_nameY116F11B.3
Y116F11B.3.1
CE26048
Y116F11B.3.2
Other_nameCELE_Y116F11B.3Accession_evidenceNDBBX284605
Public_namepcp-4
DB_infoDatabaseAceViewgene5U292
WormQTLgeneWBGene00003959
WormFluxgeneWBGene00003959
NDBlocus_tagCELE_Y116F11B.3
PanthergeneCAEEL|WormBase=WBGene00003959|UniProtKB=Q9GRV9
familyPTHR11010
NCBIgene180301
RefSeqproteinNM_075440.8
TREEFAMTREEFAM_IDTF314855
TrEMBLUniProtAccQ9GRV9
UniProt_GCRPUniProtAccQ9GRV9
SpeciesCaenorhabditis elegans
HistoryVersion_change107 Apr 2004 11:29:33WBPerson1971EventImportedInitial conversion from geneace
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classpcp
AlleleWBVar01102927
WBVar01102928
WBVar01102929
WBVar01102930
WBVar01102931
WBVar01102932
WBVar01102933
WBVar02124285
WBVar01102934
WBVar01102935
WBVar01499709
WBVar01102936
WBVar01102937
WBVar01102938
WBVar01102939
WBVar01102940
WBVar00603247
WBVar01102941
WBVar01102942
WBVar01102943
WBVar00310295
WBVar01102944
WBVar01102945
WBVar02101661
WBVar01102946
WBVar01102947
WBVar01543697
WBVar01543698
WBVar01102948
WBVar01102949
WBVar01102950
WBVar01102951
WBVar00308374
WBVar01102952
WBVar02074916
WBVar01102953
WBVar01524635
WBVar01524636
WBVar01102954
WBVar02063204
WBVar01524637
WBVar02063205
WBVar01102955
WBVar01102956
WBVar01524638
WBVar01495680
WBVar01102957
WBVar01524639
WBVar00315233
WBVar01102958
WBVar01524640
WBVar02050246
WBVar01102959
WBVar01524641
WBVar01102960
WBVar01524642
WBVar01102961
WBVar01524643
WBVar01102962
WBVar01524644
WBVar01524645
WBVar01102963
WBVar01102964
WBVar01524646
WBVar01102965
WBVar01524647
WBVar01524648
WBVar01102966
WBVar01102967
WBVar00105219
WBVar01524649
WBVar01102968
WBVar00488870
WBVar01102969
WBVar00488871
WBVar01102970
WBVar01102971
WBVar00488872
WBVar01102972
WBVar00488873
WBVar01102973
WBVar00488874
WBVar01845904
WBVar01102974
WBVar00488875
WBVar01845905
WBVar01102975
WBVar00488876
WBVar00488877
WBVar01102976
WBVar00488878
WBVar01499566
WBVar01102977
WBVar01102978
WBVar00488879
WBVar00302315
WBVar00488880
WBVar01102979
WBVar00319081
WBVar00488881
WBVar01102980
WBVar00488882
WBVar01102981
WBVar02138360
WBVar00488883
WBVar01102982
WBVar01102983
WBVar00488884
WBVar01102984
WBVar01978293
WBVar00488885
WBVar01978294
WBVar00488886
WBVar01102985
WBVar01102986
WBVar00488887
WBVar01978295
WBVar00488888
WBVar01102987
WBVar00488889
WBVar01102988
WBVar01102989
WBVar00305864
WBVar00488890
WBVar00488891
WBVar01102990
WBVar00488892
WBVar01102991
WBVar00488893
WBVar01102992
WBVar00488894
WBVar00488895
WBVar00488896
WBVar01498301
WBVar01941019
WBVar02095276
WBVar01941020
WBVar00313455
WBVar01500148
WBVar01498312
WBVar02112955
WBVar00297730
WBVar00322789
WBVar02120875
WBVar00227565
WBVar00227566
WBVar00227567
WBVar00227568
WBVar00309345
WBVar00227569
WBVar00227572
WBVar01499446
WBVar01497422
WBVar01926140
WBVar01500000
WBVar01926141
WBVar01926142
WBVar01752174
WBVar01926143
WBVar01926144
WBVar01752175
WBVar01752177
WBVar01752178
WBVar01752179
WBVar01490254
WBVar01598426
WBVar01752180
WBVar01598427
WBVar01499089
WBVar01598428
WBVar00071666
WBVar01598429
WBVar01954411
WBVar00071667
WBVar01598430
WBVar00071668
WBVar00071669
WBVar00304686
WBVar01598431
WBVar00071670
WBVar00071671
WBVar00071672
WBVar02120729
WBVar00261988
WBVar00071673
WBVar01829450
WBVar00071674
WBVar01829451
WBVar01829452
WBVar00071675
WBVar01829453
WBVar02072591
WBVar00071676
WBVar01829454
WBVar01829455
WBVar01829456
WBVar01498549
WBVar01829457
WBVar01829458
WBVar01813571
WBVar01848769
WBVar01848770
WBVar01466225
WBVar00315873
WBVar01466226
WBVar00320919
WBVar01466229
WBVar01499299
WBVar01466230
WBVar01466231
WBVar01466232
WBVar01495448
WBVar01495449
WBVar01102915
WBVar01102916
WBVar01102917
WBVar01102918
WBVar01102919
WBVar01102920
WBVar01102921
WBVar01498958
WBVar02124642
WBVar01102922
WBVar02123722
WBVar01102923
WBVar01876998
WBVar00307082
WBVar00307083
WBVar01876999
WBVar01102924
WBVar01877000
WBVar01102925
WBVar00316991
WBVar01102926
WBVar01877001
In_clusterconserved_RDE-1_cluster
RNASeq_FPKM (74)
GO_annotation00092244
00092245
00092246
00092247
00092248
00112073
00112074
Ortholog (62)
ParalogWBGene00003956Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00003957Caenorhabditis elegansFrom_analysisInparanoid_8
Panther
WormBase-Compara
WBGene00003958Caenorhabditis elegansFrom_analysisInparanoid_8
Panther
WormBase-Compara
WBGene00016134Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00017592Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00022801Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00019682Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00018984Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00017594Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00044302Caenorhabditis elegansFrom_analysisPanther
Structured_descriptionAutomated_descriptionPredicted to enable dipeptidyl-peptidase activity. Predicted to be involved in proteolysis. Located in membrane raft. Is an ortholog of human PRSS16 (serine protease 16).Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSY116F11B.3
Corresponding_transcriptY116F11B.3.1
Y116F11B.3.2
Other_sequenceACC24777_1
MA02984
HCC04047
EX540882.1
EX563930.1
HC01381
Associated_featureWBsf1003362
WBsf1021820
Experimental_infoRNAi_resultWBRNAi00055482Inferred_automaticallyRNAi_primary
Expr_patternExpr1013824
Expr1158989
Expr2014786
Expr2033020
Microarray_results (17)
Expression_cluster (228)
InteractionWBInteraction000552878
Map_infoMapVPosition23.5421Error0.004665
PositivePositive_cloneY116F11BInferred_automaticallyFrom CDS info
From sequence, transcript, pseudogene data
Pseudo_map_position
ReferenceWBPaper00029226
WBPaper00037777
WBPaper00038491
WBPaper00055090
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene