WormBase Tree Display for Gene: WBGene00003590
expand all nodes | collapse all nodes | view schema
WBGene00003590 | SMap | S_parent | Sequence | C28A5 | |||
---|---|---|---|---|---|---|---|
Identity (6) | |||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | nex | ||||||
Allele (38) | |||||||
Legacy_information | [C.elegansII] NMK. Encodes predicted protein with annexin similarity. [CGC] | ||||||
Strain | WBStrain00036168 | ||||||
RNASeq_FPKM (74) | |||||||
GO_annotation (11) | |||||||
Ortholog (29) | |||||||
Paralog | WBGene00003588 | Caenorhabditis elegans | From_analysis | Panther | |||
WormBase-Compara | |||||||
WBGene00003589 | Caenorhabditis elegans | From_analysis | Panther | ||||
WormBase-Compara | |||||||
WBGene00003591 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||
Structured_description | Concise_description | nex-3 encodes an annexin, a member of a family of calcium-dependent phospholipid binding proteins; by homology, NEX-3 could function in a number of processes, such as membrane fusion, cytoskeletal interactions, and intracellular signaling; however, as loss of nex-3 function via RNA-mediated interference (RNAi) does not result in any abnormalities, the precise role of NEX-3 in C. elegans development and/or behavior is not yet known. | Paper_evidence | WBPaper00004403 | |||
WBPaper00005654 | |||||||
WBPaper00005874 | |||||||
Curator_confirmed | WBPerson1843 | ||||||
Date_last_updated | 17 Jun 2004 00:00:00 | ||||||
Automated_description | Enables phospholipid binding activity and sulfur compound binding activity. Predicted to be located in cytoplasm. Is an ortholog of human ANXA3 (annexin A3). | Paper_evidence | WBPaper00065943 | ||||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | C28A5.3 | |||||
Corresponding_transcript | C28A5.3.1 | ||||||
Other_sequence (36) | |||||||
Associated_feature | WBsf992121 | ||||||
WBsf992122 | |||||||
WBsf224738 | |||||||
WBsf224739 | |||||||
Experimental_info | RNAi_result | WBRNAi00072953 | Inferred_automatically | RNAi_primary | |||
WBRNAi00029289 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00011285 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00072952 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00080498 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00005141 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00041389 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00072954 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr8284 | ||||||
Expr1017980 | |||||||
Expr1145422 | |||||||
Expr2013981 | |||||||
Expr2032221 | |||||||
Drives_construct | WBCnstr00036020 | ||||||
Construct_product | WBCnstr00036020 | ||||||
Antibody | WBAntibody00001200 | ||||||
Microarray_results (19) | |||||||
Expression_cluster (225) | |||||||
Interaction | WBInteraction000028927 | ||||||
WBInteraction000113565 | |||||||
WBInteraction000126522 | |||||||
WBInteraction000126583 | |||||||
WBInteraction000195723 | |||||||
WBInteraction000203295 | |||||||
WBInteraction000203471 | |||||||
WBInteraction000220393 | |||||||
WBInteraction000226548 | |||||||
WBInteraction000246276 | |||||||
WBInteraction000257449 | |||||||
WBInteraction000259788 | |||||||
WBInteraction000259789 | |||||||
WBInteraction000259790 | |||||||
WBInteraction000259791 | |||||||
WBInteraction000259792 | |||||||
WBInteraction000271409 | |||||||
WBInteraction000297974 | |||||||
WBInteraction000301451 | |||||||
WBInteraction000303792 | |||||||
WBInteraction000303793 | |||||||
WBInteraction000303794 | |||||||
WBInteraction000303795 | |||||||
WBInteraction000325730 | |||||||
WBInteraction000328441 | |||||||
WBInteraction000332746 | |||||||
WBInteraction000352704 | |||||||
WBInteraction000352973 | |||||||
WBInteraction000369940 | |||||||
WBInteraction000378997 | |||||||
WBInteraction000384241 | |||||||
WBInteraction000425643 | |||||||
WBInteraction000428275 | |||||||
WBInteraction000435101 | |||||||
WBInteraction000435569 | |||||||
WBInteraction000435893 | |||||||
WBInteraction000449363 | |||||||
WBInteraction000465002 | |||||||
WBInteraction000514740 | |||||||
WBInteraction000514745 | |||||||
WBInteraction000514746 | |||||||
WBInteraction000540102 | |||||||
WBInteraction000551486 | |||||||
WBInteraction000564092 | |||||||
WBInteraction000576330 | |||||||
Map_info | Map | III | Position | -3.17322 | Error | 0.000158 | |
Positive | Positive_clone | C28A5 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Mapping_data | Multi_point | 5582 | |||||
4211 | |||||||
Pseudo_map_position | |||||||
Reference (11) | |||||||
Remark | III -3.7 | ||||||
Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||
Method | Gene |