WormBase Tree Display for Gene: WBGene00003591
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| WBGene00003591 | SMap | S_parent | Sequence | C37H5 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | nex-4 | |||||||
| Sequence_name | C37H5.1 | ||||||||
| Molecular_name (11) | |||||||||
| Other_name | CELE_C37H5.1 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | nex-4 | ||||||||
| DB_info | Database | AceView | gene | 5F337 | |||||
| WormQTL | gene | WBGene00003591 | |||||||
| WormFlux | gene | WBGene00003591 | |||||||
| NDB | locus_tag | CELE_C37H5.1 | |||||||
| Panther | gene | CAEEL|Gene_ORFName=CELE_C37H5.1|UniProtKB=A0A131MBL3 | |||||||
| family | PTHR10502 | ||||||||
| NCBI | gene | 183294 | |||||||
| RefSeq | protein | NM_001392506.1 | |||||||
| NM_001322553.3 | |||||||||
| NM_001380638.1 | |||||||||
| TrEMBL | UniProtAcc | A0A131MBL3 | |||||||
| A0A131MB16 | |||||||||
| P91144 | |||||||||
| UniProt_GCRP | UniProtAcc | A0A131MBL3 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:32 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | nex | ||||||||
| Allele (123) | |||||||||
| Strain | WBStrain00035565 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00001916 | ||||||||
| 00001917 | |||||||||
| 00111188 | |||||||||
| 00111189 | |||||||||
| Ortholog (39) | |||||||||
| Paralog | WBGene00003589 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| WormBase-Compara | |||||||||
| WBGene00003588 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00003590 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Structured_description | Concise_description | nex-4 encodes a predicted annexin. | Paper_evidence | WBPaper00003602 | |||||
| Curator_confirmed | WBPerson48 | ||||||||
| Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
| Automated_description | Predicted to enable calcium ion binding activity. Predicted to be located in cytoplasm. Human ortholog(s) of this gene implicated in cholangiocarcinoma; hepatocellular carcinoma; and pancreatic ductal carcinoma. Is an ortholog of several human genes including ANXA10 (annexin A10); ANXA8 (annexin A8); and ANXA9 (annexin A9). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:4947 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:546) | ||||
| DOID:3587 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:546) | ||||||
| DOID:684 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:534) | ||||||
| Molecular_info | Corresponding_CDS | C37H5.1a | |||||||
| C37H5.1b | |||||||||
| C37H5.1c | |||||||||
| Corresponding_transcript | C37H5.1a.1 | ||||||||
| C37H5.1a.2 | |||||||||
| C37H5.1a.3 | |||||||||
| C37H5.1b.1 | |||||||||
| C37H5.1c.1 | |||||||||
| Other_sequence (14) | |||||||||
| Associated_feature | WBsf999892 | ||||||||
| WBsf999893 | |||||||||
| WBsf231704 | |||||||||
| WBsf231705 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00011728 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00042119 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00029644 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr5465 | ||||||||
| Expr8286 | |||||||||
| Expr1020336 | |||||||||
| Expr1031640 | |||||||||
| Expr1146120 | |||||||||
| Expr2013982 | |||||||||
| Expr2032222 | |||||||||
| Drives_construct | WBCnstr00003820 | ||||||||
| WBCnstr00036019 | |||||||||
| Construct_product | WBCnstr00036019 | ||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (143) | |||||||||
| Interaction | WBInteraction000254930 | ||||||||
| WBInteraction000428555 | |||||||||
| Map_info | Map | V | Position | -3.95563 | Error | 0.029482 | |||
| Positive | Positive_clone | C37H5 | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Mapping_data | Multi_point | 4514 | |||||||
| 4718 | |||||||||
| 4891 | |||||||||
| 5591 | |||||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00003602 | ||||||||
| WBPaper00025760 | |||||||||
| WBPaper00028908 | |||||||||
| WBPaper00038491 | |||||||||
| WBPaper00055785 | |||||||||
| WBPaper00061818 | |||||||||
| Remark | Sequence connection from [Creutz CE], 02/06/13 krb. | ||||||||
| Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
| Method | Gene |
