WormBase Tree Display for Gene: WBGene00003544
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| WBGene00003544 | Evidence | Author_evidence | Moehrlen F | ||||||
|---|---|---|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | F46C5 | ||||||
| Identity | Version | 1 | |||||||
| Name | CGC_name | nas-25 | Person_evidence | WBPerson1103 | |||||
| Sequence_name | F46C5.3 | ||||||||
| Molecular_name | F46C5.3 | ||||||||
| F46C5.3.1 | |||||||||
| CE28935 | |||||||||
| Other_name | CELE_F46C5.3 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | nas-25 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:32 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | nas | ||||||||
| Allele | WBVar01499702 | ||||||||
| WBVar01784264 | |||||||||
| WBVar02150310 | |||||||||
| WBVar01498435 | |||||||||
| WBVar01499917 | |||||||||
| WBVar00752550 | |||||||||
| WBVar00752551 | |||||||||
| WBVar02130412 | |||||||||
| WBVar00752552 | |||||||||
| WBVar00752553 | |||||||||
| WBVar00752554 | |||||||||
| WBVar00752555 | |||||||||
| WBVar00752556 | |||||||||
| WBVar00752557 | |||||||||
| WBVar00752558 | |||||||||
| WBVar00752559 | |||||||||
| WBVar00752560 | |||||||||
| WBVar01499017 | |||||||||
| WBVar00752561 | |||||||||
| WBVar00752562 | |||||||||
| WBVar00752563 | |||||||||
| WBVar00752564 | |||||||||
| WBVar00259202 | |||||||||
| WBVar01477745 | |||||||||
| WBVar01477746 | |||||||||
| WBVar01498748 | |||||||||
| WBVar00174197 | |||||||||
| WBVar00174198 | |||||||||
| WBVar00251696 | |||||||||
| WBVar02125460 | |||||||||
| WBVar00372882 | |||||||||
| WBVar00372883 | |||||||||
| WBVar01498940 | |||||||||
| WBVar00372884 | |||||||||
| WBVar00372885 | |||||||||
| WBVar00372886 | |||||||||
| WBVar00372887 | |||||||||
| Strain | WBStrain00002601 | ||||||||
| WBStrain00037798 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (13) | |||||||||
| Ortholog (33) | |||||||||
| Paralog (48) | |||||||||
| Structured_description | Concise_description | nas-25 encodes an astacin-like metalloprotease; large-scale expression studies reveal that a nas-25::GFP promoter fusion is expressed in the pharynx and pharyngeal-intestinal valve. | Paper_evidence | WBPaper00006254 | |||||
| WBPaper00006525 | |||||||||
| WBPaper00031006 | |||||||||
| Curator_confirmed | WBPerson1843 | ||||||||
| Date_last_updated | 15 Feb 2008 00:00:00 | ||||||||
| Automated_description | Predicted to enable metalloendopeptidase activity. Predicted to be involved in molting cycle and proteolysis. Predicted to be located in extracellular region. Expressed in arcade cell; marginal cell; and rectal gland cell. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F46C5.3 | |||||||
| Corresponding_CDS_history | F46C5.3:wp61 | ||||||||
| Corresponding_transcript | F46C5.3.1 | ||||||||
| Other_sequence | SRC00539_1 | ||||||||
| SSC00042_1 | |||||||||
| SS01464 | |||||||||
| Hbac_isotig02723 | |||||||||
| FC815339.1 | |||||||||
| SS00066 | |||||||||
| FC809974.1 | |||||||||
| Associated_feature | WBsf988831 | ||||||||
| WBsf1012752 | |||||||||
| WBsf221821 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00089083 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00047507 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00032355 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00015076 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Chronogram1247 | ||||||||
| Expr6086 | |||||||||
| Expr8922 | |||||||||
| Expr1013949 | |||||||||
| Expr1151347 | |||||||||
| Expr2013874 | |||||||||
| Expr2032114 | |||||||||
| Drives_construct | WBCnstr00003159 | ||||||||
| WBCnstr00013617 | |||||||||
| WBCnstr00036055 | |||||||||
| Construct_product | WBCnstr00013617 | ||||||||
| WBCnstr00036055 | |||||||||
| Microarray_results (24) | |||||||||
| Expression_cluster (105) | |||||||||
| Interaction (3) | |||||||||
| Map_info | Map | II | Position | 0.903735 | Error | 0.000817 | |||
| Positive | Positive_clone | F46C5 | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00006254 | ||||||||
| WBPaper00055090 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
