WormBase Tree Display for Gene: WBGene00003544
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WBGene00003544 | Evidence | Author_evidence | Moehrlen F | ||||
---|---|---|---|---|---|---|---|
SMap | S_parent | Sequence | F46C5 | ||||
Identity (6) | |||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | nas | ||||||
Allele (37) | |||||||
Strain | WBStrain00002601 | ||||||
WBStrain00037798 | |||||||
RNASeq_FPKM (74) | |||||||
GO_annotation (13) | |||||||
Ortholog (33) | |||||||
Paralog (48) | |||||||
Structured_description | Concise_description | nas-25 encodes an astacin-like metalloprotease; large-scale expression studies reveal that a nas-25::GFP promoter fusion is expressed in the pharynx and pharyngeal-intestinal valve. | Paper_evidence | WBPaper00006254 | |||
WBPaper00006525 | |||||||
WBPaper00031006 | |||||||
Curator_confirmed | WBPerson1843 | ||||||
Date_last_updated | 15 Feb 2008 00:00:00 | ||||||
Automated_description | Predicted to enable metalloendopeptidase activity. Predicted to be involved in molting cycle and proteolysis. Predicted to be located in extracellular region. Expressed in arcade cell; marginal cell; and rectal gland cell. | Paper_evidence | WBPaper00065943 | ||||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | F46C5.3 | |||||
Corresponding_CDS_history | F46C5.3:wp61 | ||||||
Corresponding_transcript | F46C5.3.1 | ||||||
Other_sequence | SRC00539_1 | ||||||
SSC00042_1 | |||||||
SS01464 | |||||||
Hbac_isotig02723 | |||||||
FC815339.1 | |||||||
SS00066 | |||||||
FC809974.1 | |||||||
Associated_feature | WBsf988831 | ||||||
WBsf1012752 | |||||||
WBsf221821 | |||||||
Experimental_info | RNAi_result | WBRNAi00089083 | Inferred_automatically | RNAi_primary | |||
WBRNAi00047507 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00032355 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00015076 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Chronogram1247 | ||||||
Expr6086 | |||||||
Expr8922 | |||||||
Expr1013949 | |||||||
Expr1151347 | |||||||
Expr2013874 | |||||||
Expr2032114 | |||||||
Drives_construct | WBCnstr00003159 | ||||||
WBCnstr00013617 | |||||||
WBCnstr00036055 | |||||||
Construct_product | WBCnstr00013617 | ||||||
WBCnstr00036055 | |||||||
Microarray_results (24) | |||||||
Expression_cluster (105) | |||||||
Interaction (3) | |||||||
Map_info | Map | II | Position | 0.903735 | Error | 0.000817 | |
Positive | Positive_clone | F46C5 | Inferred_automatically | From CDS info | |||
From sequence, transcript, pseudogene data | |||||||
Pseudo_map_position | |||||||
Reference | WBPaper00006254 | ||||||
WBPaper00055090 | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |