WormBase Tree Display for Gene: WBGene00003539
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| WBGene00003539 | Evidence | Author_evidence | Moehrlen F | ||||||
|---|---|---|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | T11F9 | ||||||
| Identity | Version | 1 | |||||||
| Name | CGC_name | nas-20 | Person_evidence | WBPerson1103 | |||||
| Sequence_name | T11F9.3 | ||||||||
| Molecular_name | T11F9.3 | ||||||||
| T11F9.3.1 | |||||||||
| CE35907 | |||||||||
| Other_name | CELE_T11F9.3 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | nas-20 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:32 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | nas | ||||||||
| Allele (21) | |||||||||
| Strain | WBStrain00033239 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (13) | |||||||||
| Ortholog (30) | |||||||||
| Paralog (48) | |||||||||
| Structured_description | Concise_description | nas-20 encodes an astacin-like metalloprotease. | Paper_evidence | WBPaper00006254 | |||||
| Curator_confirmed | WBPerson1843 | ||||||||
| Date_last_updated | 15 Feb 2008 00:00:00 | ||||||||
| Automated_description | Predicted to enable metalloendopeptidase activity. Predicted to be involved in molting cycle and proteolysis. Predicted to be located in extracellular region. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | T11F9.3 | |||||||
| Corresponding_CDS_history | T11F9.3:wp111 | ||||||||
| Corresponding_transcript | T11F9.3.1 | ||||||||
| Other_sequence | JI219344.1 | ||||||||
| Associated_feature | WBsf234539 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00053126 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00018603 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00035479 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00089156 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1022996 | ||||||||
| Expr1156732 | |||||||||
| Expr2013870 | |||||||||
| Expr2032109 | |||||||||
| Drives_construct | WBCnstr00036058 | ||||||||
| Construct_product | WBCnstr00036058 | ||||||||
| Microarray_results (21) | |||||||||
| Expression_cluster (223) | |||||||||
| Interaction (155) | |||||||||
| Map_info | Map | V | Position | 3.13921 | Error | 0.004557 | |||
| Positive | Positive_clone | T11F9 | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00006254 | ||||||||
| WBPaper00032165 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00063976 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
