WormBase Tree Display for Gene: WBGene00003539
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WBGene00003539 | Evidence | Author_evidence | Moehrlen F | ||||
---|---|---|---|---|---|---|---|
SMap | S_parent | Sequence | T11F9 | ||||
Identity (6) | |||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | nas | ||||||
Allele (21) | |||||||
Strain | WBStrain00033239 | ||||||
RNASeq_FPKM (74) | |||||||
GO_annotation (13) | |||||||
Ortholog (30) | |||||||
Paralog (48) | |||||||
Structured_description | Concise_description | nas-20 encodes an astacin-like metalloprotease. | Paper_evidence | WBPaper00006254 | |||
Curator_confirmed | WBPerson1843 | ||||||
Date_last_updated | 15 Feb 2008 00:00:00 | ||||||
Automated_description | Predicted to enable metalloendopeptidase activity. Predicted to be involved in molting cycle and proteolysis. Predicted to be located in extracellular region. | Paper_evidence | WBPaper00065943 | ||||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | T11F9.3 | |||||
Corresponding_CDS_history | T11F9.3:wp111 | ||||||
Corresponding_transcript | T11F9.3.1 | ||||||
Other_sequence | JI219344.1 | ||||||
Associated_feature | WBsf234539 | ||||||
Experimental_info | RNAi_result | WBRNAi00053126 | Inferred_automatically | RNAi_primary | |||
WBRNAi00018603 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00035479 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00089156 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr1022996 | ||||||
Expr1156732 | |||||||
Expr2013870 | |||||||
Expr2032109 | |||||||
Drives_construct | WBCnstr00036058 | ||||||
Construct_product | WBCnstr00036058 | ||||||
Microarray_results (21) | |||||||
Expression_cluster (223) | |||||||
Interaction (155) | |||||||
Map_info | Map | V | Position | 3.13921 | Error | 0.004557 | |
Positive | Positive_clone | T11F9 | Inferred_automatically | From CDS info | |||
From sequence, transcript, pseudogene data | |||||||
Pseudo_map_position | |||||||
Reference | WBPaper00006254 | ||||||
WBPaper00032165 | |||||||
WBPaper00055090 | |||||||
WBPaper00063976 | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |