WormBase Tree Display for Gene: WBGene00003531
expand all nodes | collapse all nodes | view schema
WBGene00003531 | Evidence | Author_evidence | Moehrlen F | |||
---|---|---|---|---|---|---|
SMap | S_parent | Sequence | CHROMOSOME_IV | |||
Identity (6) | ||||||
Gene_info | Biotype | SO:0001217 | ||||
Gene_class | nas | |||||
Allele (37) | ||||||
Strain | WBStrain00002662 | |||||
RNASeq_FPKM (74) | ||||||
GO_annotation (12) | ||||||
Ortholog (32) | ||||||
Paralog (48) | ||||||
Structured_description | Concise_description | nas-12 encodes an astacin-like metalloprotease; large-scale expression studies reveal that a nas-12::GFP promoter fusion is expressed in the intestine and in the pharyngeal and rectal gland cells. | Paper_evidence | WBPaper00006254 | ||
WBPaper00006525 | ||||||
WBPaper00031006 | ||||||
Curator_confirmed | WBPerson1843 | |||||
Date_last_updated | 15 Feb 2008 00:00:00 | |||||
Automated_description | Predicted to enable metalloendopeptidase activity. Predicted to be involved in proteolysis. Predicted to be located in extracellular region. Expressed in g1AL; g1AR; g1P; g2L; and g2R. | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | |||||
WBPerson37462 | ||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||
Date_last_updated | 29 Nov 2023 00:00:00 | |||||
Molecular_info | Corresponding_CDS | C24F3.3 | ||||
Corresponding_CDS_history | C24F3.3:wp109 | |||||
Corresponding_transcript | C24F3.3.1 | |||||
Other_sequence | FD515450.1 | |||||
CSC01859_1 | ||||||
Associated_feature | WBsf646293 | |||||
WBsf660572 | ||||||
WBsf228966 | ||||||
Experimental_info | RNAi_result | WBRNAi00011112 | Inferred_automatically | RNAi_primary | ||
WBRNAi00041093 | Inferred_automatically | RNAi_primary | ||||
WBRNAi00088991 | Inferred_automatically | RNAi_primary | ||||
WBRNAi00029148 | Inferred_automatically | RNAi_primary | ||||
Expr_pattern | Expr5328 | |||||
Expr8913 | ||||||
Expr10174 | ||||||
Expr1014158 | ||||||
Expr1145130 | ||||||
Expr2013862 | ||||||
Expr2032102 | ||||||
Drives_construct | WBCnstr00003205 | |||||
WBCnstr00013607 | ||||||
WBCnstr00015504 | ||||||
WBCnstr00036065 | ||||||
Construct_product | WBCnstr00013607 | |||||
WBCnstr00036065 | ||||||
Microarray_results (22) | ||||||
Expression_cluster (113) | ||||||
Interaction | WBInteraction000177452 | |||||
WBInteraction000179826 | ||||||
WBInteraction000254746 | ||||||
WBInteraction000255496 | ||||||
WBInteraction000268072 | ||||||
WBInteraction000328233 | ||||||
WBInteraction000394191 | ||||||
WBInteraction000438853 | ||||||
WBInteraction000460519 | ||||||
Map_info | Map | IV | Position | 4.56187 | ||
Positive | Positive_clone | C24F3 | Inferred_automatically | From CDS info | ||
From sequence, transcript, pseudogene data | ||||||
Pseudo_map_position | ||||||
Reference | WBPaper00006254 | |||||
WBPaper00038491 | ||||||
WBPaper00041256 | ||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||
Method | Gene |