WormBase Tree Display for Gene: WBGene00003530
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WBGene00003530 | Evidence | Author_evidence | Moehrlen F | ||||||
---|---|---|---|---|---|---|---|---|---|
SMap | S_parent | Sequence | K11G12 | ||||||
Identity | Version | 1 | |||||||
Name | CGC_name | nas-11 | Person_evidence | WBPerson1103 | |||||
Sequence_name | K11G12.1 | ||||||||
Molecular_name | K11G12.1a | ||||||||
K11G12.1a.1 | |||||||||
CE36313 | |||||||||
K11G12.1b | |||||||||
CE37260 | |||||||||
K11G12.1b.1 | |||||||||
Other_name | CELE_K11G12.1 | Accession_evidence | NDB | BX284606 | |||||
Public_name | nas-11 | ||||||||
DB_info | Database (12) | ||||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 07 Apr 2004 11:29:32 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | nas | ||||||||
Allele (41) | |||||||||
Strain | WBStrain00002661 | ||||||||
WBStrain00037635 | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation (12) | |||||||||
Ortholog (25) | |||||||||
Paralog (48) | |||||||||
Structured_description | Concise_description | nas-11 encodes an astacin-like metalloprotease; loss of nas-11 activity via RNAi has been reported to result in slow growth; large-scale expression studies reveal that a nas-11::GFP promoter fusion is expressed in the hypodermis and the nervous system. | Paper_evidence | WBPaper00005654 | |||||
WBPaper00006254 | |||||||||
WBPaper00006525 | |||||||||
WBPaper00031006 | |||||||||
Curator_confirmed | WBPerson1843 | ||||||||
Date_last_updated | 15 Feb 2008 00:00:00 | ||||||||
Automated_description | Predicted to enable metalloendopeptidase activity. Predicted to be involved in proteolysis. Predicted to be located in extracellular region. Expressed in hyp7 syncytium; intestine; and neuronal sheath cell. | Paper_evidence | WBPaper00065943 | ||||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | K11G12.1a | |||||||
K11G12.1b | |||||||||
Corresponding_CDS_history | K11G12.1:wp115 | ||||||||
K11G12.1:wp129 | |||||||||
Corresponding_transcript | K11G12.1a.1 | ||||||||
K11G12.1b.1 | |||||||||
Other_sequence | FG620939.1 | ||||||||
CBC10628_1 | |||||||||
FG620889.1 | |||||||||
MIC02404_1 | |||||||||
BE217622.1 | |||||||||
CJC04147_1 | |||||||||
MI02892 | |||||||||
Associated_feature | WBsf1005619 | ||||||||
WBsf235864 | |||||||||
Experimental_info | RNAi_result | WBRNAi00061411 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00050609 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00008989 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00050608 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr6390 | ||||||||
Expr8912 | |||||||||
Expr1012139 | |||||||||
Expr1154317 | |||||||||
Expr2013861 | |||||||||
Expr2032101 | |||||||||
Drives_construct | WBCnstr00003204 | ||||||||
WBCnstr00013606 | |||||||||
WBCnstr00036066 | |||||||||
Construct_product | WBCnstr00013606 | ||||||||
WBCnstr00036066 | |||||||||
Microarray_results (23) | |||||||||
Expression_cluster (183) | |||||||||
SAGE_tag (14) | |||||||||
Interaction (20) | |||||||||
Map_info | Map | X | Position | -2.54938 | |||||
Positive | Positive_clone | K11G12 | Inferred_automatically | From CDS info | |||||
From sequence, transcript, pseudogene data | |||||||||
Pseudo_map_position | |||||||||
Reference | WBPaper00006254 | ||||||||
WBPaper00024242 | |||||||||
WBPaper00064789 | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |