WormBase Tree Display for Gene: WBGene00002991
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WBGene00002991 | SMap | S_parent | Sequence | F17E5 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | |||||||
Name | CGC_name | lin-2 | Person_evidence | WBPerson261 | |||||
Sequence_name | F17E5.1 | ||||||||
Molecular_name | F17E5.1a | ||||||||
F17E5.1a.1 | |||||||||
CE27131 | |||||||||
F17E5.1b | |||||||||
CE27132 | |||||||||
F17E5.1b.1 | |||||||||
Other_name | CELE_F17E5.1 | Accession_evidence | NDB | BX284606 | |||||
Public_name | lin-2 | ||||||||
DB_info | Database (11) | ||||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 07 Apr 2004 11:29:30 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | lin | ||||||||
Reference_allele | WBVar00143908 | ||||||||
Allele (248) | |||||||||
Possibly_affected_by | WBVar02157232 | ||||||||
Legacy_information | e1309 : adult hermaphrodite vulvaless (penetrance 93%); ES2 (adult)/ ES1 (larvae); HME2; adult male wildtype ME3. NA13 (e1453amber (non-null lower penetrance than e1309 50% vulvaless) n105ts (penetrance 24% at 15x 90% at 25x) n768 (weak allele multiple vulval protrusions penetrance 21%) etc.). | ||||||||
See also e1309, e1424, e1437, e1453, n105, n167, n305, n380, n670, n674, n768, n1052, n1297, n1298 | |||||||||
[C.elegansII] e1309 : adult hermaphrodite vulvaless (penetrance 93%); ES2 (adult)/ ES1 (larvae); HME2; adult male wildtype ME3. NA13: e1453amb (non-null, lower penetrance than e1309, 50% vulvaless), n105ts (penetrance 24% at 15C, 90% at 25C) n768 (weak allele multiple vulval protrusions penetrance 21%), n397 (deletes most of gene), etc. Cloned: encodes predicted protein with PDZ domain,similarity to guanylate kinase, Drosophila discs large. Mutants delocalize LET-23. [Ferguson et al. 1985; SD; MT] | |||||||||
Strain (14) | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation (26) | |||||||||
Ortholog (43) | |||||||||
Paralog | WBGene00006467 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00016841 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00021914 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Panther | |||||||||
WormBase-Compara | |||||||||
Structured_description (2) | |||||||||
Disease_info (2) | |||||||||
Models_disease_asserted | WBDOannot00000474 | ||||||||
Molecular_info | Corresponding_CDS | F17E5.1a | |||||||
F17E5.1b | |||||||||
Corresponding_CDS_history | F17E5.1a:wp47 | ||||||||
F17E5.1b:wp47 | |||||||||
Corresponding_transcript | F17E5.1a.1 | ||||||||
F17E5.1b.1 | |||||||||
Other_sequence (49) | |||||||||
Associated_feature (16) | |||||||||
Experimental_info | RNAi_result | WBRNAi00013468 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00030265 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00044888 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00000540 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00076312 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern (11) | |||||||||
Drives_construct | WBCnstr00022290 | ||||||||
WBCnstr00036300 | |||||||||
Construct_product | WBCnstr00012382 | ||||||||
WBCnstr00021427 | |||||||||
WBCnstr00036300 | |||||||||
WBCnstr00038376 | |||||||||
WBCnstr00038378 | |||||||||
WBCnstr00041675 | |||||||||
Antibody | WBAntibody00000973 | ||||||||
WBAntibody00001507 | |||||||||
Microarray_results (28) | |||||||||
Expression_cluster (169) | |||||||||
Interaction (292) | |||||||||
Map_info | Map | X | Position | 7.04058 | Error | 0.007077 | |||
Well_ordered | |||||||||
Positive | Inside_rearr | yDp11 | |||||||
Positive_clone | C43C10 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||||
F17E5 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||||
Mapping_data | 2_point | 168 | |||||||
280 | |||||||||
281 | |||||||||
Multi_point (25) | |||||||||
Pos_neg_data | 320 | ||||||||
686 | |||||||||
687 | |||||||||
871 | |||||||||
8424 | |||||||||
8431 | |||||||||
8443 | |||||||||
8451 | |||||||||
8457 | |||||||||
Landmark_gene | |||||||||
Reference (172) | |||||||||
Method | Gene |