WormBase Tree Display for Sequence: F17E5
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| F17E5 | DNA | F17E5 | 30548 | |||
|---|---|---|---|---|---|---|
| SMap | S_child | Gene_child | WBGene00200930 | 28303 | 28158 | |
| WBGene00198419 | 16176 | 16478 | ||||
| WBGene00171381 | 15776 | 15796 | ||||
| WBGene00201967 | 23184 | 23359 | ||||
| WBGene00008924 | 3051 | 8329 | ||||
| WBGene00002991 | 22834 | 8310 | ||||
| CDS_child (156) | ||||||
| Transcript | F17E5.3 | 15776 | 15796 | |||
| F17E5.4 | 16176 | 16478 | ||||
| F17E5.5 | 28303 | 28158 | ||||
| F17E5.6 | 23184 | 23359 | ||||
| F17E5.1a.1 | 22834 | 8310 | ||||
| F17E5.1b.1 | 14654 | 8311 | ||||
| F17E5.2.1 | 3058 | 8327 | ||||
| F17E5.2.2 | 3051 | 8329 | ||||
| Nongenomic | yk213c8 | 8378 | 22794 | |||
| PCR_product | cenix:147-c4 | 10473 | 11658 | |||
| cenix:64-b11 | 4840 | 5574 | ||||
| mv_CAA63314 | 8784 | 22817 | ||||
| mv_CAA63315 | 8783 | 14653 | ||||
| mv_F17E5.2 | 3210 | 7277 | ||||
| sjj_F17E5.1 | 10003 | 11143 | ||||
| sjj_F17E5.2 | 4742 | 5905 | ||||
| Allele (473) | ||||||
| Oligo_set | Aff_F17E5.1A | 10235 | 8781 | |||
| Aff_F17E5.2 | 6436 | 7279 | ||||
| Feature_object (182) | ||||||
| Feature_data | F17E5:Polysome | 1 | 30548 | |||
| F17E5:TranscriptionallyActiveRegion | 1 | 30548 | ||||
| F17E5:ChIPSeqTF | 1 | 30548 | ||||
| F17E5:TRF | 1 | 30548 | ||||
| F17E5:Dust | 1 | 30548 | ||||
| F17E5:inverted | 1 | 30548 | ||||
| Homol_data (20) | ||||||
| Structure | From | Source | CHROMOSOME_X | |||
| Overlap_right | T24D3 | 30449 | ||||
| Overlap_left | F19H6 | |||||
| Clone_left_end | F17E5 | 1 | ||||
| T24D3 | 30449 | |||||
| Clone_right_end | F19H6 | 11506 | ||||
| DB_info | Database | EMBL | NDB_AC | Z50873 | ||
| NDB_SV | Z50873.2 | |||||
| DB_remark | [121025] Sequence correction WBsf268060 : Deletion C-1 bases @ 25534 | |||||
| Keyword | HTG | |||||
| EMBL_dump_info | EMBL_dump_method | worm_EMBL-dump | ||||
| Origin | From_author | McMurray AA | ||||
| From_laboratory | HX | |||||
| Date_directory | 950327 | |||||
| Species | Caenorhabditis elegans | |||||
| Strain | WBStrain00000001 | |||||
| Visible | Clone | F17E5 | ||||
| Properties | Genomic_canonical | |||||
| Checksum | MD5 | f70de5ef58d0a1c87b50810148445748 | ||||
| Status | Finished | 27 Mar 1995 00:00:00 | ||||
| Submitted | 31 Aug 1995 00:00:00 | |||||
| Annotated | 29 Aug 1995 00:00:00 | |||||
| Map | Sequence-X | Ends | Left | 6691 | ||
| Right | 6708 | |||||
| Interpolated_map_position | X | 7.04052 | ||||
| Assembly_tags | Clone left end | 1 | 4 | left hand end of F17E5 | ||
| 30449 | 30452 | left hand end of T24D3 | ||||
| Clone right end | 11503 | 11506 | right hand end of F19H6 | |||
| End of F19H6 | ||||||
| annotation | 22932 | 22980 | Bases 22932 to 22980 (48bp) not d.s. but region covered by terminators | |||
| 22997 | 23024 | Walks leading into run of G's (looks like 17 G's) have ambiguous data over bases 22997 to 23007 but base counting looks correct | ||||
| 23052 | 23096 | Bases 23052 to 23096 (44bp) not d.s. but data confirmed with terminators | ||||
| Method | Genomic_canonical |
