WormBase Tree Display for Gene: WBGene00002255
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WBGene00002255 | SMap | S_parent | Sequence | F40F4 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | |||||||
Name | CGC_name | lbp-3 | Person_evidence | WBPerson492 | |||||
Sequence_name | F40F4.4 | ||||||||
Molecular_name | F40F4.4a | ||||||||
F40F4.4a.1 | |||||||||
CE30130 | |||||||||
F40F4.4b | |||||||||
CE39932 | |||||||||
F40F4.4b.1 | |||||||||
Other_name | CELE_F40F4.4 | Accession_evidence | NDB | BX284606 | |||||
Public_name | lbp-3 | ||||||||
DB_info | Database | WormQTL | gene | WBGene00002255 | |||||
WormFlux | gene | WBGene00002255 | |||||||
NDB | locus_tag | CELE_F40F4.4 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00002255|UniProtKB=Q20222 | |||||||
family | PTHR22725 | ||||||||
NCBI | gene | 180615 | |||||||
RefSeq | protein | NM_001047785.4 | |||||||
NM_001392744.1 | |||||||||
SwissProt | UniProtAcc | Q20222 | |||||||
TrEMBL | UniProtAcc | Q27GU2 | |||||||
UniProt_GCRP | UniProtAcc | Q20222 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 07 Apr 2004 11:29:27 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | lbp | ||||||||
Allele (16) | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00067524 | ||||||||
00067525 | |||||||||
00067526 | |||||||||
00110320 | |||||||||
Ortholog (27) | |||||||||
Paralog | WBGene00002253 | Caenorhabditis elegans | From_analysis | Panther | |||||
WormBase-Compara | |||||||||
WBGene00002254 | Caenorhabditis elegans | From_analysis | Panther | ||||||
WormBase-Compara | |||||||||
WBGene00002259 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
WBGene00002258 | |||||||||
WBGene00002257 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
WBGene00002260 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
WBGene00021486 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
WBGene00002256 | Caenorhabditis elegans | From_analysis | Inparanoid_8 | ||||||
Panther | |||||||||
WormBase-Compara | |||||||||
Structured_description | Concise_description | lbp-3 encodes a predicted secreted fatty acid binding protein (FABP) that is similar to the Ascaris suum secreted FABP As-p18; by homology, LBP-3 is predicted to function in sequestering or transporting small hydrophobic molecules such as lipids and steroid hormones; an lbp-3::gfp promoter fusion is expressed in the embryo, with expression seen in presumptive hypodermal cells by the comma stage and in posterior body wall muscle cells by the twofold stage; lbp-3::gfp expression in larvae and adults is seen in body wall muscle cells adjacent to the pseudocoelom. | Paper_evidence | WBPaper00003911 | |||||
Curator_confirmed | WBPerson1843 | ||||||||
Date_last_updated | 16 Jan 2008 00:00:00 | ||||||||
Automated_description | Predicted to enable lipid binding activity. Predicted to be located in extracellular region. | Paper_evidence | WBPaper00065943 | ||||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | F40F4.4a | |||||||
F40F4.4b | |||||||||
Corresponding_CDS_history | F40F4.4:wp155 | ||||||||
Corresponding_transcript | F40F4.4a.1 | ||||||||
F40F4.4b.1 | |||||||||
Other_sequence (19) | |||||||||
Associated_feature | WBsf647922 | ||||||||
WBsf647923 | |||||||||
WBsf235458 | |||||||||
Experimental_info (8) | |||||||||
Map_info | Map | X | Position | -10.662 | |||||
Positive | Positive_clone | F40F4 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Pseudo_map_position | |||||||||
Reference | WBPaper00003911 | ||||||||
WBPaper00023807 | |||||||||
WBPaper00025114 | |||||||||
WBPaper00026800 | |||||||||
WBPaper00041973 | |||||||||
WBPaper00042257 | |||||||||
WBPaper00049940 | |||||||||
WBPaper00064156 | |||||||||
Remark | probable errors in exon choice | ||||||||
Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
Method | Gene |