WormBase Tree Display for Gene: WBGene00002030

WBGene00002030 SMap: S_parent: Sequence: CHROMOSOME_II
  Identity: Version: 2
    Name: CGC_name: hst-3.1 Person_evidence: WBPerson1831
            WBPerson1705
      Sequence_name: F40H3.5
      Molecular_name: F40H3.5
        F40H3.5.1
        CE46574
      Other_name: hst-3 Person_evidence: WBPerson1831
        CELE_F40H3.5 Accession_evidence: NDB BX284602
      Public_name: hst-3.1
    DB_info: Database: AceView gene 2G456
        WormQTL gene WBGene00002030
        WormFlux gene WBGene00002030
        NDB locus_tag CELE_F40H3.5
        Panther gene CAEEL|WormBase=WBGene00002030|UniProtKB=Q9TZK5
          family PTHR10605
        NCBI gene 185573
        RefSeq protein NM_062829.3
        TrEMBL UniProtAcc Q9TZK5
        UniProt_GCRP UniProtAcc Q9TZK5
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:26 WBPerson1971 Event: Imported: Initial conversion from geneace
        2 21 Sep 2006 11:29:48 WBPerson1857 Name_change: Other_name: hst-3
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: hst
    Allele (48)
    Strain: WBStrain00031901
    RNASeq_FPKM (74)
    GO_annotation: 00098078
      00098079
      00098080
      00098081
      00109889
    Ortholog (39)
    Paralog: WBGene00002028 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00044303 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
    Structured_description: Automated_description: Predicted to enable [heparan sulfate]-glucosamine 3-sulfotransferase 1 activity. Involved in heparan sulfate proteoglycan biosynthetic process. Predicted to be located in Golgi lumen. Expressed in several structures, including coelomocyte; distal tip cell; neurons; non-striated muscle; and rectal epithelial cell. Is an ortholog of human HS3ST1 (heparan sulfate-glucosamine 3-sulfotransferase 1) and HS3ST5 (heparan sulfate-glucosamine 3-sulfotransferase 5). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: F40H3.5
    Corresponding_CDS_history: F40H3.5:wp228
    Corresponding_transcript: F40H3.5.1
    Other_sequence (14)
    Associated_feature (12)
  Experimental_info: RNAi_result: WBRNAi00014700 Inferred_automatically: RNAi_primary
      WBRNAi00115295 Inferred_automatically: RNAi_primary
      WBRNAi00024024 Inferred_automatically: RNAi_primary
      WBRNAi00023738 Inferred_automatically: RNAi_primary
      WBRNAi00023226 Inferred_automatically: RNAi_primary
      WBRNAi00046921 Inferred_automatically: RNAi_primary
      WBRNAi00023461 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr10713
      Expr11890
      Expr1023701
      Expr1031185
      Expr1150791
      Expr2012635
      Expr2030871
    Drives_construct: WBCnstr00017485
      WBCnstr00019714
      WBCnstr00019715
    Microarray_results (27)
    Expression_cluster (117)
    Interaction: WBInteraction000275122
      WBInteraction000433568
      WBInteraction000524033
  Map_info: Map: II Position: -0.414104 Error: 0.001298
    Positive: Positive_clone: F40H3 Inferred_automatically: From CDS info
            From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference (19)
  Remark: Sequence connection from [Turnbull J, Kinnunen T]. krb 13/11/01
    Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene