WormBase Tree Display for Gene: WBGene00001646
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| WBGene00001646 | SMap | S_parent | Sequence | B0024 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | gna-1 | |||||||
| Sequence_name | B0024.12 | ||||||||
| Molecular_name | B0024.12 | ||||||||
| B0024.12.1 | |||||||||
| CE05156 | |||||||||
| Other_name | CeGNA1 | Accession_evidence | EMBL | AB017628 | |||||
| CELE_B0024.12 | Accession_evidence | NDB | BX284605 | ||||||
| Public_name | gna-1 | ||||||||
| DB_info | Database (12) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:25 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | gna | ||||||||
| Allele (14) | |||||||||
| Strain | WBStrain00003065 | ||||||||
| WBStrain00055601 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (12) | |||||||||
| Contained_in_operon | CEOP5252 | ||||||||
| Ortholog (28) | |||||||||
| Paralog | WBGene00001647 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| Structured_description | Concise_description | gna-1 encodes one of two C. elegans glucosamine 6-phosphateN-acetyltransferases (GNAs); by homology, GNA-1 is predicted to berequired for the formation of UDP-N-acetylglucosamine, a substrate inchitin synthesis, Golgi and cytoplasmic glycosylation, and GPIanchoring; gna-1, like chs-2, is expressed pharyngeally rather than ingermline, and (unlike its paralog gna-2) does not have anosmotically-sensitive embryonic lethal RNAi phenotype; as loss of gna-1activity via large-scale RNAi screens does not result in any obviousabnormalities, the precise role of GNA-1 in C. elegans developmentand/or behavior is not yet known. | Paper_evidence | WBPaper00005654 | |||||
| WBPaper00006390 | |||||||||
| WBPaper00006525 | |||||||||
| WBPaper00018602 | |||||||||
| WBPaper00025054 | |||||||||
| WBPaper00028588 | |||||||||
| Curator_confirmed | WBPerson1843 | ||||||||
| Date_last_updated | 07 Apr 2007 00:00:00 | ||||||||
| Automated_description | Predicted to enable glucosamine 6-phosphate N-acetyltransferase activity and monosaccharide binding activity. Predicted to be involved in UDP-N-acetylglucosamine biosynthetic process. Predicted to be located in Golgi apparatus; endoplasmic reticulum; and endoplasmic reticulum-Golgi intermediate compartment. Is an ortholog of human GNPNAT1 (glucosamine-phosphate N-acetyltransferase 1). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | B0024.12 | |||||||
| Corresponding_transcript | B0024.12.1 | ||||||||
| Other_sequence (16) | |||||||||
| Associated_feature | WBsf652983 | ||||||||
| WBsf234372 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00078682 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00038647 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00009547 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00078681 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00028236 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Chronogram1862 | ||||||||
| Expr5010 | |||||||||
| Expr1014842 | |||||||||
| Expr1030986 | |||||||||
| Expr1142854 | |||||||||
| Expr2012156 | |||||||||
| Expr2030392 | |||||||||
| Drives_construct | WBCnstr00003558 | ||||||||
| WBCnstr00036800 | |||||||||
| Construct_product | WBCnstr00036800 | ||||||||
| Microarray_results (18) | |||||||||
| Expression_cluster (111) | |||||||||
| Interaction (67) | |||||||||
| Map_info | Map | V | Position | 2.48157 | Error | 0.002893 | |||
| Positive | Positive_clone | B0024 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00018602 | ||||||||
| WBPaper00038491 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00056694 | |||||||||
| WBPaper00059250 | |||||||||
| WBPaper00061294 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
