WormBase Tree Display for Gene: WBGene00001520
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WBGene00001520 | SMap | S_parent | Sequence | K09A9 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 3 | |||||||
Name | CGC_name | gas-1 | Person_evidence | WBPerson431 | |||||
Sequence_name | K09A9.5 | ||||||||
Molecular_name | K09A9.5 | ||||||||
K09A9.5.1 | |||||||||
CE11980 | |||||||||
Other_name | nduf-2.1 | ||||||||
ndus-2.1 | Person_evidence | WBPerson555 | |||||||
CELE_K09A9.5 | Accession_evidence | NDB | BX284606 | ||||||
Public_name | gas-1 | ||||||||
DB_info | Database (13) | ||||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 07 Apr 2004 11:29:24 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
2 | 26 Feb 2008 13:49:33 | WBPerson2970 | Name_change | Other_name | nduf-2.1 | ||||
3 | 16 Jan 2023 18:37:21 | WBPerson51134 | Name_change | Other_name | ndus-2.1 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | gas | ||||||||
Allele (69) | |||||||||
Legacy_information | [Morgan PG] fc21 exhibits increased sensitivity to a variety of volatile anesthetics. Also ts lethal, with brood size of 10 - 20 at 25C, 50 - 100 at 20C. fc21/Df almost lethal, brood size 5 - 10. Probable hypomorph. Encodes NADH-ubiquinone reductase. Predicted gene K09A9.5 | ||||||||
Strain | WBStrain00037441 | ||||||||
WBStrain00005211 | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation (20) | |||||||||
Ortholog (40) | |||||||||
Paralog | WBGene00006463 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
Inparanoid_8 | |||||||||
Panther | |||||||||
WormBase-Compara | |||||||||
Structured_description | Concise_description | The gas-1 gene encodes a 49 kDa subunit of mitochondrial complex I that is required for oxidative phosphorylation, resistance to volatile anesthetics, fecundity, and normal lifespan; gas-1 is expressed in the nematode neuromuscular system; its subcellular distribution appears to be mitochondrial; drug effects on mutants versus wild-type indicate that gas-1 functions at least partially through presynaptic effects; gas-1 mutants have strongly reduced Complex I-dependent metabolism in mitochondria, while Complex II-dependent metabolism is conversely increased in mutants; gas-1 mitochondria look structurally normal. | Paper_evidence | WBPaper00004719 | |||||
WBPaper00028429 | |||||||||
Curator_confirmed | WBPerson567 | ||||||||
Date_last_updated | 13 Dec 2006 00:00:00 | ||||||||
Automated_description | Predicted to enable several functions, including 4 iron, 4 sulfur cluster binding activity; NAD binding activity; and NADH dehydrogenase (ubiquinone) activity. Involved in mitochondrial electron transport, NADH to ubiquinone and response to xenobiotic stimulus. Located in intracellular membrane-bounded organelle. Expressed in anterior gonad arm; body wall musculature; nervous system; non-striated muscle; and tail. Used to study alcohol use disorder and mitochondrial complex I deficiency. Human ortholog(s) of this gene implicated in several diseases, including Leigh disease; multiple sclerosis; and nuclear type mitochondrial complex I deficiency 6. Is an ortholog of human NDUFS2 (NADH:ubiquinone oxidoreductase core subunit S2). | Paper_evidence | WBPaper00065943 | ||||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Disease_info | Experimental_model | DOID:1574 | Homo sapiens | Paper_evidence | WBPaper00005840 | ||||
Curator_confirmed | WBPerson324 | ||||||||
Date_last_updated | 29 Apr 2019 00:00:00 | ||||||||
DOID:0060536 | Homo sapiens | Paper_evidence | WBPaper00046523 | ||||||
WBPaper00061258 | |||||||||
Curator_confirmed | WBPerson324 | ||||||||
Date_last_updated | 19 Oct 2021 00:00:00 | ||||||||
Potential_model | DOID:11984 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:7708) | |||||
DOID:3652 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:7708) | ||||||
DOID:2377 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:7708) | ||||||
DOID:655 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:7708) | ||||||
DOID:0112066 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:7708) | ||||||
Models_disease_asserted | WBDOannot00000655 | ||||||||
WBDOannot00001068 | |||||||||
WBDOannot00001069 | |||||||||
WBDOannot00001070 | |||||||||
WBDOannot00001071 | |||||||||
Molecular_info | Corresponding_CDS | K09A9.5 | |||||||
Corresponding_transcript | K09A9.5.1 | ||||||||
Other_sequence (78) | |||||||||
Associated_feature | WBsf671384 | ||||||||
WBsf671385 | |||||||||
WBsf671386 | |||||||||
WBsf671387 | |||||||||
WBsf238335 | |||||||||
WBsf238336 | |||||||||
WBsf238337 | |||||||||
WBsf238338 | |||||||||
Experimental_info | RNAi_result (18) | ||||||||
Expr_pattern | Expr1348 | ||||||||
Expr13130 | |||||||||
Expr1015145 | |||||||||
Expr1030915 | |||||||||
Expr1154073 | |||||||||
Expr2011948 | |||||||||
Expr2030185 | |||||||||
Drives_construct | WBCnstr00010230 | ||||||||
WBCnstr00036891 | |||||||||
Construct_product | WBCnstr00036891 | ||||||||
Regulate_expr_cluster | WBPaper00046217:gas-1(fc21)_downregulated | ||||||||
WBPaper00046217:gas-1(fc21)_upregulated | |||||||||
Microarray_results (19) | |||||||||
Expression_cluster (177) | |||||||||
Interaction (99) | |||||||||
WBProcess | WBbiopr:00000001 | ||||||||
WBbiopr:00000077 | |||||||||
Map_info | Map | X | Position | 22.8752 | Error | 0.00989 | |||
Well_ordered | |||||||||
Positive | Inside_rearr | mnDf1 | |||||||
Positive_clone | K09A9 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||||
Mapping_data | Pos_neg_data | 9392 | |||||||
Reference (86) | |||||||||
Method | Gene |